Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04851 ATGTTTGAAGGAGATTGGCGTACATTAGTACATTACAAAGATGATTTTCCTCAGATTGCCAAGTTAGCCTCAACTGGAAATTACCATGTGGGGAGAGATTGTAGTTCTTGGTCAATTTCTATCAGCTTTCAGGGGAGAATGCCATTCTTCTCATCTGCCAAGCAGATCCCTCCCTCAATTCAACAACGTTATAGCTTCAATTCACAATCCCAGATTCTCCTTCATCGGATCTATCTTCTGGATTTTGAACCCATTGTCACACAGACAAGGAAATCAGTCATGGCTCCCTCTAGGAAATCTAGAAGTGTAAATAAGAGGTTTTCTAATATTCGCGAGGCTGCATCTAGTAAAGATAAAGATTCAGTGAATGCTGGCAAGAATAGTCAGAAGACAAGTGCTGGTATTCAGAAGAAGAGAAAATTGGCTGACATGTTAGGGCCACAATGGAGTAAGGAGGAGCTTGAGCGTTTCTATGAAGCTTACCGTAAATATGGGAAAGATTGGAAGAAGGTTGCTCTTGCAGTACGTAATAGATCTATGGAAATGGTAGAAGCCCTGTACACTATGAACAGGGCATACTTATCTCTTCCGGAGGGCACTGCTTCTGTTGTTGGACTGATAGCGATGATGACGGATCATTATAGTGTACTGGGAGGAAGTGACAGTGGAAAAGAAAGCAATGAAGATGCAGAAATATCTAAAAGGTCTCGAAAGCGTTTGCATGGAAAGCATCTAAATGACAATAAAGCATTAGATGGAAATTTTTCAGACCATTCTCAGTCGCATTCTGTTGCATCAGAGGATGGTTGCTTGTCATTGCTGAAGAAGAGGCATTCTGACATTAGGCCTCATGCCGTTCGAAAAAGGACTCCCCGTGTCCCTATTTCATATTCTATCGAGGCTTCACAAAGAGGTGGCTCTTCAAAAATTTCTGGATCACCAAACAAGAAAAATATGCCATCACCTGATCTGAAAAGTGTGAAGCATGTTAAATCAGAAATAGCTGGAGCCAAATTTTGCAGTTCTGACATGAATGAGAGTAGTTCCGAATTGAGTTTAGGAAGCACCGAAGGTGATAATGGAGATTATTCTAGAAAACCAATTCATCGGAGCAGTAGAGAAAATACTGGAAGAGGAAGGAAACGGGAAAAGGGAATCAAACACTACGGGAAGAATTTGGAACCTGAGGAAAATTTAAACAAGCATTTGAATGACATAAAGGAGGCCTCCAGTGGGACCGATGATGGTAAAAAAATGAGTTTCATCAAATCCAAATTTGACACAGACTTTGCAGATGCAAAAAATGCAAGGTCCTCTTACAAGAATCCCAGGAAAAAAAGTAAAAAACTACTGTTTGAGAAAGATGAAGGTTCTGCTTTTGATGCTCTGAAAACTCTGGCTGATCTGTCTTTGCTGATGCCAGTAACAAACCCTGACTCTGAGTCATCTGCACAGTTCAAGGAAGGAAGTCATGATGTTGTTGATGAGTCTAAAATAGAAACACATAATGTAGTTCCTAGGATTGAAAGCACTGCTTCAAGTAAATTGGACAAGGTTTTTTCTGACAATGTAGCCGCTGCCCCTGAAGCAGAGGAAGCGTACCAGCTTAATACAGGAATCAGGAAAAGAAAACAAAAATCTTTTACCTTAAAAAATGTTGAAACTCATACTGGTTCTCATTTAAGTGGTTCCCAGAAAAACAAGGTTATTGATGAGCTGAAAAAGCCTATGGTTAAAGGCAAGCGGTCATCTGTTTCTACAGCGCATTCAAAGCAACTAAAAGTGGTGAAATCCCCAGGAAATATGTCTTCAAATACCAATGACAAAGGGGAAAGGGATGATTCATCTTTTCCCCCCATAAAGATTTCATCTACTAACCAAGTCAGTCAAGTAAACAGAGGAAGGCCTAGAAGAAAGATGGAAAAACCAAAACCAATGGTCCAACGAGATCCGATGGTGTTTGGAAATATTTTTAATGGTCAACATAATAAATCCACCGCTTCACTCCAACATAGTTCTTCTAGTTACAAGGGAAAGCTTATTAATTGCCTATCTTCACATCAAATGCGGCGATGGTGCATTTTTGAGTGGTTTTATAGTGCTATCGATTATCCATGGTTTTCGAAGAGGGAGTTTGTAGAATACTTAGACCATGTTGGATTGGGTCATGTTCCTAGATTGACTCGTATTGAGTGGGGAGTCATTAGAAGTTCTCTTGGAAGACCACGAAGATTTTCAGAGCAATTCTTGATGGAAGAGAAACATAAACTTTATCAATATCGGGAATCTGTCAGATCACATTATGCTGAAGTTCTTGCTGGTACCAAGGAAGGCCTTCCTACAGATTTGGCCCAGCCTTTAATTGTTGGGCAGTGTGTTATTGCTATTCATCCAAAGACGAGAGAGATTCATGATGGAAGTATATTGACTGTAGAACATTGTAGGTGCCGGGTTCAGTTTGACCAGCCTGAACTTGGGGTTGAATTTGTCATGGATATTGACTGCATGCCTTTGTATCCATCCGAAAATATGCCCACATCTCTGATTAGACACGATATCTCTCCTGATAGAATAAATGAGAACCTGAATGAGCTGAAGCATAATGGGAAACTGAAACAAAGAAAGATTGCTGAGCACACAATATTGTCCCCTAGTGAGAACTCAGATACCATTAAAGGTCTTTATATATCCCCCACTATGCATGGAAGCAGTGCTTTATCTAAACTGGGGTTTTCTCCGAGCTTCAAATCACAGGCGAAAGTTGTGTGCAGTGAGATTGGTAATGCCCAACTAGCATCAAGTTCTCAACCTTCTCTTCTTGAACATGTCCATTCAAAAGATGCTGACATATTAGCTATTTCAGAGTTGACTCGTGCTCTAGACAAGAAGGAACTTGTGTTGTCTGAACTGAAGTACATGAATGATGGGGTATCAGAAAGCCAGAAATACGGAGACAACTCTGTGAAGGATTCAGAACCTTTTAAGAGGAATTATGCTTCAGTACTGAAGCAATTAACTGAAGTGAATGAACAGGTTTCTTCTTCCTTGTTTTGCTTGAGGCAACGCAACACATATCAAGCAAGCTCCTCAGTTTTTTCATTAAAGCCTATGACTAATTTTGATGATCCTGGTGGTCAGGCTAGCTCTTCCAATTGTTCAGCCTGTCACAACCAAGAATCTACATCTCAAAGTCATATAGCTGAAATTGTTGAAAGTTCTAGAAGAAAAGCCCGGACTATGGTTGTTCAAGCTACTCAGGCAATGTCGGTTTTTAGAAAGACAGAGAGTAAGGTTGAAAAAATTGAGGATGCAATAAATTTTATCAATAACCGGCTTTCAGTTGATGACCCTACTGCATCAGCGACAAATTTTCTGCCCACAGATTCTATTACTTTGACTTCTCAAGATCTGTTGACTGCCAGCACATTAAATCCCTTGGCAAGTTGTCATGTACAAGATGCTGAACTTAACAGCTCACCTGACCAAAATGAAATGAAAATTCCCTCAGAACTCATATCTCATTGTCTAGCTACACTGCTCATGATTCAGAAATGTACCGAACGACAGTTTCCCCCGGCGGATGTTGCTCAGGTACTAGATTCTGCTGTCACCAGTTTGCAGCCATTTTGCTCAAAGAATCTTCCAATATATGGTGAGATACAGAAATGCATGGGTATCATAAGAAATCAGATATTGGCACTTGTACCTACCTAG 3714 0.4031 MFEGDWRTLVHYKDDFPQIAKLASTGNYHVGRDCSSWSISISFQGRMPFFSSAKQIPPSIQQRYSFNSQSQILLHRIYLLDFEPIVTQTRKSVMAPSRKSRSVNKRFSNIREAASSKDKDSVNAGKNSQKTSAGIQKKRKLADMLGPQWSKEELERFYEAYRKYGKDWKKVALAVRNRSMEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSGKESNEDAEISKRSRKRLHGKHLNDNKALDGNFSDHSQSHSVASEDGCLSLLKKRHSDIRPHAVRKRTPRVPISYSIEASQRGGSSKISGSPNKKNMPSPDLKSVKHVKSEIAGAKFCSSDMNESSSELSLGSTEGDNGDYSRKPIHRSSRENTGRGRKREKGIKHYGKNLEPEENLNKHLNDIKEASSGTDDGKKMSFIKSKFDTDFADAKNARSSYKNPRKKSKKLLFEKDEGSAFDALKTLADLSLLMPVTNPDSESSAQFKEGSHDVVDESKIETHNVVPRIESTASSKLDKVFSDNVAAAPEAEEAYQLNTGIRKRKQKSFTLKNVETHTGSHLSGSQKNKVIDELKKPMVKGKRSSVSTAHSKQLKVVKSPGNMSSNTNDKGERDDSSFPPIKISSTNQVSQVNRGRPRRKMEKPKPMVQRDPMVFGNIFNGQHNKSTASLQHSSSSYKGKLINCLSSHQMRRWCIFEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLMEEKHKLYQYRESVRSHYAEVLAGTKEGLPTDLAQPLIVGQCVIAIHPKTREIHDGSILTVEHCRCRVQFDQPELGVEFVMDIDCMPLYPSENMPTSLIRHDISPDRINENLNELKHNGKLKQRKIAEHTILSPSENSDTIKGLYISPTMHGSSALSKLGFSPSFKSQAKVVCSEIGNAQLASSSQPSLLEHVHSKDADILAISELTRALDKKELVLSELKYMNDGVSESQKYGDNSVKDSEPFKRNYASVLKQLTEVNEQVSSSLFCLRQRNTYQASSSVFSLKPMTNFDDPGGQASSSNCSACHNQESTSQSHIAEIVESSRRKARTMVVQATQAMSVFRKTESKVEKIEDAINFINNRLSVDDPTASATNFLPTDSITLTSQDLLTASTLNPLASCHVQDAELNSSPDQNEMKIPSELISHCLATLLMIQKCTERQFPPADVAQVLDSAVTSLQPFCSKNLPIYGEIQKCMGIIRNQILALVPT* 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04851 1237 MobiDBLite consensus disorder prediction 583 606 - -
Rops2g04851 1237 PANTHER LIN-9 94 1237 IPR010561 GO:0006351|GO:0017053
Rops2g04851 1237 MobiDBLite consensus disorder prediction 618 633 - -
Rops2g04851 1237 SUPERFAMILY Homeodomain-like 145 192 IPR009057 -
Rops2g04851 1237 ProSiteProfiles SANT domain profile. 144 181 IPR017884 -
Rops2g04851 1237 Coils Coil 1091 1111 - -
Rops2g04851 1237 MobiDBLite consensus disorder prediction 120 135 - -
Rops2g04851 1237 MobiDBLite consensus disorder prediction 362 385 - -
Rops2g04851 1237 MobiDBLite consensus disorder prediction 344 385 - -
Rops2g04851 1237 SMART sant 145 193 IPR001005 -
Rops2g04851 1237 MobiDBLite consensus disorder prediction 577 646 - -
Rops2g04851 1237 MobiDBLite consensus disorder prediction 282 326 - -
Rops2g04851 1237 CDD SANT 149 183 IPR001005 -
Rops2g04851 1237 Pfam DIRP 697 798 IPR033471 -
Rops2g04851 1237 Pfam Myb-like DNA-binding domain 148 183 IPR001005 -
Rops2g04851 1237 MobiDBLite consensus disorder prediction 91 137 - -
Rops2g04851 1237 Gene3D - 81 201 - -
Rops2g04851 1237 MobiDBLite consensus disorder prediction 91 110 - -
Rops2g04851 1237 SMART DIRP_2 698 799 IPR033471 -
Rops2g04851 1237 MobiDBLite consensus disorder prediction 296 320 - -
Rops2g04851 1237 MobiDBLite consensus disorder prediction 218 263 - -
Rops2g04851 1237 MobiDBLite consensus disorder prediction 344 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04851 Rops-Chr2 87685821 87715584 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops2g04851 DIRP 1.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04851 - - gmx:100781646 1838.93