Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04850 ATGGTGACATTATTGTCAAGAACCTTACCATTGCCGATCCAAAAACGTTACCCTCTTCTCAAACTTCAACTCTACCCATCAATACAATTTTTCTGCACCACCACCGCCGATTCACACTCTCATACGGTGTCGTATCTCATCAACAATTTTGGGTTCTCCCCAGAAACCGCTTTCAAAGCTTCCCACAAGCTTCGTCTCCACAACTCCCAAAAACCAGATTCGGTTCTCTCCTTCTTCAGAACCCACGGCTTCTCTGACTCTCAAATACGTGATATCACAAGAAGGGAACTACAGTTCCTCTCCTGCGACCCCCACAAGGTACTCTTGCCCAAGTTTCAATTTTTACTCTCTAAAGGTGCTTCTACCTCTGATATTGTTCACATGGTGTGTATCGGCCCCAAATTCCTGCTCAGAAGCTTACACAATCATATAATCCCTACATACGAATTTGTAAGAGGGTTCCTTCAATCTGACAAGCAAGCCATTGCTTGTATGAATCGTCATTCTTGTTTTCTTTCTGATAGTCGCATGGCACGTAACGTTAAATTGATGCTTGATAATGGAGTCACTCACTCAAACATTGTTAGGTTGTTTCACACACGGCCTACTATACTTTGCTCAAATGACCTGTTGAAGACAGTTGAGGAATTGAAGGAACTGGGTTTCAAGTCTTCAACTTTAACTTTTAGTGTGGCATTGCTTGCCAAGAGAACTGTGAGCAAAACCAGGTGGGCTGAGAAAAGTAAAATCTTTAAGAGGTGGGGTTGGTCTCAACAACACATTCTTGAAGCATTTAAGAAGCAGCCTCATTGTATGTTGTCATCCAGTGATAAAATTAATGCAGTGATGAGTTTTTGGGTTAATGAATTTGGTTTTAATTCTTTGGACCTTGTCAAAGCTCCGGGAATTTTTTCATTTAGTCTCGAGAAGAGGATTATTCCAAGGGCTTCAGTTCTGCAGTTTCTTATCTCTAAAGGTCTGCGGGACAAGGATGCAGGCGTGAATACACCATTTAATATTACTGAGAAGTTGTTCCTGGATAAATTTGTGGAATGTTTTAAGGAGGATTCTTCTCAGCTGTTAAAGCTTTATGAGGAAAAAATGAAACTTGCTAATGGCAGGGAGAAAACCTTCACTGAGTGTGTAACTTCTTAA 1155 0.4104 MVTLLSRTLPLPIQKRYPLLKLQLYPSIQFFCTTTADSHSHTVSYLINNFGFSPETAFKASHKLRLHNSQKPDSVLSFFRTHGFSDSQIRDITRRELQFLSCDPHKVLLPKFQFLLSKGASTSDIVHMVCIGPKFLLRSLHNHIIPTYEFVRGFLQSDKQAIACMNRHSCFLSDSRMARNVKLMLDNGVTHSNIVRLFHTRPTILCSNDLLKTVEELKELGFKSSTLTFSVALLAKRTVSKTRWAEKSKIFKRWGWSQQHILEAFKKQPHCMLSSSDKINAVMSFWVNEFGFNSLDLVKAPGIFSFSLEKRIIPRASVLQFLISKGLRDKDAGVNTPFNITEKLFLDKFVECFKEDSSQLLKLYEEKMKLANGREKTFTECVTS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04850 384 FunFam Mitochondrial transcription termination factor-like 140 357 - -
Rops2g04850 384 Gene3D Transcription termination factor 3, mitochondrial 156 363 IPR038538 -
Rops2g04850 384 Pfam mTERF 239 345 IPR003690 GO:0003690|GO:0006355
Rops2g04850 384 Pfam mTERF 76 227 IPR003690 GO:0003690|GO:0006355
Rops2g04850 384 SMART mt_12 90 121 IPR003690 GO:0003690|GO:0006355
Rops2g04850 384 SMART mt_12 262 293 IPR003690 GO:0003690|GO:0006355
Rops2g04850 384 SMART mt_12 195 223 IPR003690 GO:0003690|GO:0006355
Rops2g04850 384 SMART mt_12 294 328 IPR003690 GO:0003690|GO:0006355
Rops2g04850 384 SMART mt_12 126 157 IPR003690 GO:0003690|GO:0006355
Rops2g04850 384 PANTHER CGI-12 PROTEIN-RELATED 38 354 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04850 Rops-Chr2 87683934 87685262 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops2g04850 mTERF 3.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04850 K15032 - gmx:102667698 422.165