Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04838 ATGGGTAGTTGTTTTCCTTGTTTTGGATCATCCAACAAGGGGGACACTGGGGTGAAAGAAGTGGCCAAGAAGGATTCTTTTAAAGAAGCTTCAGTTGTTCAGTCTAACCATTCCACCAGGGTCAGCTCAGGAAGCTGTTTTGAAGTATTATATGTCATTACTCCTCATGTAGCTGCATCACATGTGCAGCATCAACATCACGATAACTCAATATCACGGAGTGCCTCAGATCCTAAGAAGGAACTTCCCATTCCGAATGGGCCACCAGCCAATATCGCTGCACAAACATTTACATTCCGAGAGCTTGCAGCTGCTACCAAGAATTTTAGGCCAGAATGTTTATTAGGTGAGGGGGGCTTTGGGCGTGTATACAAAGGTCGCCTTGAGAGCACGGGGCAAGTAGTTGCTGTGAAACAGCTTGACCGAAATGGCCTTCAAGGAAATCGAGAATTTTTGGTTGAGGTTCTCATGCTCAGCCTCTTACATCACCCAAATCTTGTGAACTTAATAGGTTATTGTGCTGATGGTGATCAGCGGCTACTTGTATATGAATTTATGCCGTTGGGGTCTTTGGAGGATCATTTACATGATCTTCCTCCTGACAAGGAGCCCCTTGACTGGAACACAAGGATGAAAATAGCAGCTGGTGCAGCTAAGGGATTAGAATATTTGCATGACAAGGCAAATCCCCCTGTAATATATAGAGACTTAAAATCATCCAACATCCTCCTGGATGAGGGTTATCATCCAAAGTTATCAGATTTTGGGTTAGCTAAACTTGGTCCTGTTGGTGATAAGACTCATGTATCCACACGAGTAATGGGAACATATGGTTATTGTGCCCCAGAATATGCTATGACTGGGCAACTAACTCTGAAGTCTGATGTGTACAGTTTTGGAGTGGTCTTCCTCGAACTTATTACAGGGCGCAAGGCTATTGATAATACACGTTCACATGGAGAGCATAATCTGGTTGCATGGGCACGACCACTTTTTAAAGACCGTAGGAAGTTTCCCAAAATGGCTGACCCTCTGCTTCAAGGCCGTTATCCAATGCGAGGACTTTATCAAGCACTTGCTGTTGCAGCAATGTGTTTGCAGGAACAAGCTGCAACAAGGCCTCTCATCGGTGATGTTGTGACTGCTCTTACATACCTGGCCTCACAGACATATGATCCAAATGCAGCCAGCCAGTCAAACAGAGTTGGTCCATCAACCCCGAGGAATAGGGATGATCGAAGGAACATTGCAGATGGCACAGATAGCCCGGATCGTGGACGGCTTGGCTCCCCTTCCACCCATAGAAATTCACCTGATTTTAGGAAAAGAGATACAAATGCTGGGTCAGAGTTAGGCAGGACTGAAAATGGTGGTGGGTCAGGTAGGAAATGGGGATTGGATGATATAGAAAGGCAGGAATCTCAGAGAGGCAGCCCTGTAAATACTGGAAGAGCCAGAGAAACTCCAAGGAATCGTGACCTGGACAGAGAACGTGCAGTTGCAGAGGCAAAAGTATGGGGTGAAAATTGGAGAGAAAAGAAGAGGGCAAATGCAGTGGGTAGCTTTGATGCTACAAATGAGTAA 1584 0.4558 MGSCFPCFGSSNKGDTGVKEVAKKDSFKEASVVQSNHSTRVSSGSCFEVLYVITPHVAASHVQHQHHDNSISRSASDPKKELPIPNGPPANIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRSHGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAASQSNRVGPSTPRNRDDRRNIADGTDSPDRGRLGSPSTHRNSPDFRKRDTNAGSELGRTENGGGSGRKWGLDDIERQESQRGSPVNTGRARETPRNRDLDRERAVAEAKVWGENWREKKRANAVGSFDATNE* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04838 527 PANTHER OS07G0668900 PROTEIN 37 396 - -
Rops2g04838 527 ProSiteProfiles Protein kinase domain profile. 109 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04838 527 Gene3D Phosphorylase Kinase; domain 1 93 185 - -
Rops2g04838 527 FunFam Serine/threonine-protein kinase PBS1 85 185 - -
Rops2g04838 527 FunFam Serine/threonine-protein kinase PBS1 186 401 - -
Rops2g04838 527 MobiDBLite consensus disorder prediction 393 497 - -
Rops2g04838 527 SUPERFAMILY Protein kinase-like (PK-like) 88 383 IPR011009 -
Rops2g04838 527 MobiDBLite consensus disorder prediction 62 87 - -
Rops2g04838 527 CDD STKc_IRAK 115 384 - -
Rops2g04838 527 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Rops2g04838 527 SMART serkin_6 109 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04838 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Rops2g04838 527 Pfam Protein kinase domain 114 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04838 527 MobiDBLite consensus disorder prediction 406 421 - -
Rops2g04838 527 Gene3D Transferase(Phosphotransferase) domain 1 186 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04838 Rops-Chr2 87555171 87560611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04838 91 388 Glycoside Hydrolase AT3G07070 76.174 6.85e-170 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Rops2g04838 Pkinase 4.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04838 - - gmx:100814575 894.419