Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04829 ATGGGTTGTGTGTTTGGGAAAGAGGCTTCAGGGAGGAAAGTGGAAGTGGAAGTTGCAAAGGCAGAAGAGGGTGAGTGTGAGGTTCACAATGGGAAAGAGGTTGGTGAAGAGGAGAAGAGTAGCAGGAGGCAAAGGGGGGAGAGGAAGCGATCTTCAAAGCCAAATCCAAGGTTGAGCAATCCACCTAACCATGTACATGGTGAGCAAGTTGCTGCAGGGTGGCCCTCTTGGCTCTCCAAGGTTGCTGGGGAAGCCATTAATGGAATAACCCCTAGAAGGGCAGACACTTTTGAGAAGCTTGATAAGATTGGACAAGGTACATATAGTAATGTGTACAAAGCTAAGGATACTTTAACTGGGAAAATTGTAGCCCTAAAGAAGGTCCGTTTTGACAATTTAGAGCCTGAGAGTGTGAAATTCATGGCCAGAGAAATTCTGATTCTACGTCGTCTGGATCATCCCAATGTTGTCAAACTAGAAGGTTTAGTGACTTCTAGAATGTCCTGCAGTTTGTATCTTGTCTTTGAGTACATGGAACATGATTTGGCTGGACTTTCTACAAGTCCCACAATTAAGTTCACTGAGTCTCAGGTTAAATGTTACATGCATCAGCTCCTTTCTGGACTTGAGCACTGTCACAACCGTCATGTGCTGCATCGTGATCTAAAGGGATCAAACCTTCTTATTGACAATGAAGGCATTCTTAGGATTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTAATCACAAACACCCTATGACCAGTAGGGTGGTTACTTTATGGTATCGACCTCCAGAACTACTTCTTGGAGCCACTGATTATGGTGTAGGAGTGGACCTCTGGAGTGCTGGCTGTATTCTCGCTGAATTATTGGCTGGAAAGCCCATTATGCCTGGTCGAACAGAGGTGGAGCAGCTACATAAGATATTTAAGCTATGTGGTTCTCCTTCTGAAGAATATTGGAAAAAGTCAAAGTTGCCACATGCTACCATTTTTAAGCCCCAACAGTCATACAAGAGGTGCATAGCAGAGAAGTTTGAAGATTTCCCACCATCATCCCTGCCATTAATTGAGACCCTTCTTGCAATCGATCCAGCTGAACGTCAAACTGCCACTGCTGCATTGCATAGTGAATTCTTCACAACAAGACCTTATGCTTGTGAACCCTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATTCAAAGCTACGGGATGAAGAAGCTAGAAGATTGAGAGCGGCTGGCAGAGCTAATGCTAATGGTGTCAAGAAATCTCGTCCACGTAATCGAGGTGGGAGGGGAATTCCAGTTCCAGATGCCAATGCTGAGCTGCAAGCAAATATTGATAGATGGCGACTGATAACACATGCAAATGCTAAGAGCAAGAGTGAGAAGTTTCCTCCTCCCCACCAAGATGGAACTCTAGGCTATCCTTTGGGTTCTTCGCATCACATGGATCCAGTTTTTGATCCTCCTGATGTTCCATTTAGTTCCACAAACTTCTCATATCCTAAAGCAAATATCCAAACCTGGTCCGGCCCATTGGTGGAACCTAGTATGGGTGCACCAAGGAGAAGGAAGAACAAGGCCAGGTGA 1605 0.4505 MGCVFGKEASGRKVEVEVAKAEEGECEVHNGKEVGEEEKSSRRQRGERKRSSKPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGITPRRADTFEKLDKIGQGTYSNVYKAKDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLSTSPTIKFTESQVKCYMHQLLSGLEHCHNRHVLHRDLKGSNLLIDNEGILRIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAEKFEDFPPSSLPLIETLLAIDPAERQTATAALHSEFFTTRPYACEPSSLPKYPPSKEMDSKLRDEEARRLRAAGRANANGVKKSRPRNRGGRGIPVPDANAELQANIDRWRLITHANAKSKSEKFPPPHQDGTLGYPLGSSHHMDPVFDPPDVPFSSTNFSYPKANIQTWSGPLVEPSMGAPRRRKNKAR* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04829 534 PANTHER CELL DIVISION PROTEIN KINASE 95 385 - -
Rops2g04829 534 MobiDBLite consensus disorder prediction 1 68 - -
Rops2g04829 534 MobiDBLite consensus disorder prediction 418 444 - -
Rops2g04829 534 MobiDBLite consensus disorder prediction 10 45 - -
Rops2g04829 534 Gene3D Transferase(Phosphotransferase) domain 1 180 420 - -
Rops2g04829 534 Gene3D Phosphorylase Kinase; domain 1 85 179 - -
Rops2g04829 534 MobiDBLite consensus disorder prediction 514 534 - -
Rops2g04829 534 FunFam probable serine/threonine-protein kinase At1g54610 180 421 - -
Rops2g04829 534 SMART serkin_6 97 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04829 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Rops2g04829 534 CDD STKc_CDK9_like 97 381 - -
Rops2g04829 534 SUPERFAMILY Protein kinase-like (PK-like) 91 386 IPR011009 -
Rops2g04829 534 Pfam Protein kinase domain 97 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04829 534 ProSitePatterns Protein kinases ATP-binding region signature. 103 126 IPR017441 GO:0005524
Rops2g04829 534 FunFam probable serine/threonine-protein kinase At1g54610 84 179 - -
Rops2g04829 534 ProSiteProfiles Protein kinase domain profile. 97 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04829 Rops-Chr2 87434295 87438779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04829 92 419 Core Cell Cycle Gene Families AT5G10270 51.453 4.73e-116 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Rops2g04829 Pkinase 9.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04829 K08819 - gmx:100791757 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04829 2 87434295 87438779 Rops11g00921 11 13135547 13141845 PCT