Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04826 ATGGCTGCCGGAGCTTTATATGAGAAACTAGCGACTGTGATGACCTCTGATCATGCTTCAGTGGTCTCAATGAACTTATTTGTTGCTCTTCTCTGCACTTGCATCATAATTGGTCACTTGTTGGAGGAGAATCGATGGATTAATGAATCCATCACTGCCCTTCTCATTGGTCTTTGTACTGGGGTGTTAATATTGCTTACAACTGGAGGAAAAAGCTCTCATATATTAGTTTTCAGTGAAGATCTTTTCTTTATTTACCTTCTCCCACCCATCATTTTCAATGCCGGGTTTCAGGTCAAGAAGAAACAATTTTTCCGCAATTTTATGACTATCATGCTCTTTGGTGCAATTGGTACATTGATATCATTCTGCATCATATCACTAGGTGCCATACACTTTTTCCAGATATTAGATATTGGTTCTCTCAAGATTGGAGATTATCTAGCAATTGGAGCAATATTTTCAGCAACAGATTCTGTTTGCACGTTGCAGGTTCTTAATCAGGATGAGACACCTTTACTATACAGCCTGGTCTTTGGGGAGGGGGTAGTGAATGATGCTACCTCGGTGGTACTCTTCAATGCAATTCAGAATTTCGACCTTTCCCACATTGACGTAATCACTGCCTTACAGTTAATAGGAAACTTTTTATATTTATTCATTGCAAGCACTGTGCTGGGAATCTTAGCTGGACTGCTTAGCGCATACATCATTAAAAAGCTCTATTTTGGCAAGTTGATAAGGCATTCTACAGACCGTGAGGTTGCTCTCATGATACTTATGGCTTACCTTTCATATATGCTAGCTGAACTATTTTCTTTAAGTGCCATTCTGACTGTGTTCTTCAGTGGCATTGTTATGTCTCACTACACATGGCATAATGTGACAGAAAGTTCAAGAGTGACGACCAAGCATGCTTTTGCTACTTTGTCATTCATTGCTGAGATATTTATCTTCCTTTATGTTGGGATGGATGCACTAGATATAGAGAAGTGGCGATTTGTAAGTCAAAGCCCAAGAAAATCAATTGGAGTCAGTTCATTGCTGTTGGCACTTATCCTAGTGGGAAGAGCTGCATTTGTTTTCCCTCTGTCCTTCTTATCCAACTTGTCTAAGAAGTCTCAATCTGAGAAAATTGAGTTCAAGCAACAAGTAACAATTTGGTGGGCTGGTCTCATGCGTGGAGCTGTTTCTATCGCACTTGCTTACAATCAGTTTACAAGGCTAGGCCATACTAAATTGCGTGAGAATGCCATCATGATCACCAGTACTATCACTGTTGTACTCTTCAGCACAGTGGTATTTGGGTTGATGACAAAGCCACTTGTAAGGCTATTGCTTCCTTCTTCTAAACAAATAATCAACATACCGTCCCCACCATCGACTCCAAAATCATTTACTGTGCCACTTCTTAGCAATGGACAAGATTCAGGGGTCAATGGTGGCACACAAAATGGGACTCGACCAAGCAGCTTGCGTATGCTTCTAAGCTTTCCTACTCGTGGGGTGCACCACTATTGGCGCAAATTTGATGATTCTGTCATGAGACCTGTCTTTGGTGGGCGGGGTTTTGTACCATATGTTCCTGGTTCACCCCTTGAACAAAGTGTTCATCAGTGGCATTAA 1626 0.4114 MAAGALYEKLATVMTSDHASVVSMNLFVALLCTCIIIGHLLEENRWINESITALLIGLCTGVLILLTTGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAIGTLISFCIISLGAIHFFQILDIGSLKIGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQNFDLSHIDVITALQLIGNFLYLFIASTVLGILAGLLSAYIIKKLYFGKLIRHSTDREVALMILMAYLSYMLAELFSLSAILTVFFSGIVMSHYTWHNVTESSRVTTKHAFATLSFIAEIFIFLYVGMDALDIEKWRFVSQSPRKSIGVSSLLLALILVGRAAFVFPLSFLSNLSKKSQSEKIEFKQQVTIWWAGLMRGAVSIALAYNQFTRLGHTKLRENAIMITSTITVVLFSTVVFGLMTKPLVRLLLPSSKQIINIPSPPSTPKSFTVPLLSNGQDSGVNGGTQNGTRPSSLRMLLSFPTRGVHHYWRKFDDSVMRPVFGGRGFVPYVPGSPLEQSVHQWH* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04826 541 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops2g04826 541 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops2g04826 541 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops2g04826 541 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops2g04826 541 Gene3D - 143 195 - -
Rops2g04826 541 PANTHER SODIUM/HYDROGEN EXCHANGER 15 519 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Rops2g04826 541 Pfam Sodium/hydrogen exchanger family 28 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04826 Rops-Chr2 87383716 87388411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04826 4 539 Antiporters AT3G05030 75.046 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04826 - - ccaj:109808409 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04826 2 87383716 87388411 Rops2g04826 2 87383716 87388411 ECH