Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04820 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGACATTGCTGAAAAGAAGATGGAAAGCAGGGATTTCATTGGGGCTCGTAAATTTGCTCTCAAGGCTCAGCAGCTGTATCCTGATCTGGAAAATATAGCTCAAATGCTTGTAGTTTGTGATGTGCACTGCTCTTCTGAGCAGCGATTGTTTGGTAATGAGATGGATTGGTATGAAATTCTTCAACTTGAACAGACTGCCAATGATGCAACAATTAAGAAGCAATACAGGAAGTTTGCTCTCCAACTTCATCCTGACAAAAACAAGTTTGCTGGGGCAGAAGCTGCGTTTAAGCTGATTGGGGAAGCTCAAAGAGTGCTTTTGGACAGAGATAAACGATCTAAGTATGACATAAAGCGTAGGGTTTCAATGAACAAAACTGCTATGTCTAGTCATAATCCTCCGAAGGTTCCTATGAATTTCAATTCTGCGACGAAAACCAATGTCAAGCCCAATTTTACAAACTTGAACTCTCAGCAGCAGCAGCAATATAGGCAGCCAGTGCAACAGCAGCAGCAATATAGGCAGCCAGTGCAGCTGCAGCAAAATGGTGGCCGCCCTACTTTTTGGACTATCTGCCCATTTTGTTCTGTTAAGTATCAGTATTATAGAGAAGTTTTAAATAAATCTCTTCGCTGTCAACATTGCAGTAGGCCTTTCATTGCATATGATGTTGGTTGGAAAGGTACATCATCAGCAACTAATTCAAGTCAGCAACCTTTTGGCCAGCAAAAAGATGGGCTGAATCATGATGCTTCCAGGGTGGGTGTTGGGTCTCAAGGAAACTTGCATGCTGAGAAGTCCAATACAGGGCCTTATGAGAAAAAAGGTCCTATTGATGTCTCTGAAAAGCCACACGGAAAGAGAAAGAGGAATCAGGTGGCAGAATCCAATCAAAGTTCTGGTTTTACGAGCAGCACTGATTCTGAAGGTGATATGGCTGTTGGTGAGGATGGTTTTCCTGGTGTTGAAAACCATTCAACTTATAGAGAAGAGCAACCACGCAGATCTGCACGACAAAAGCATAAGGTTTCCTACAAGGAGAATGTGAATGACAATGATGATGACACCTTAAGACCTTCAAAAAACAGCAAGGAGAGTGGATCACCATGTGGTGATGGTGAAAGTCTTGGTGAGACAACTAAAATGAATGATCAGAATGGTTTGGCTGCTAATCTAAAAGTTGAACATAAAAAGGTAAAACAGAAACAAGATTTTCATTCTACGGAGAGCTTGCATAATAGAAATGAGGAAACTAAGAGGGTGAGGGGAAATGAAGCAGTGGAAGGGTTGAAGCAGATGAATGAAACTTCAGTGCATTTTTCTCCGGTTTCACCCTCCAAAGCAATTCCAAATGCTTATGTCTATCCTGATGCAGAGTTCAGTGACTTTGACAAGGACAAAAAAGAAGAATGTTTTGCGGCTGGGCAGATTTGGGCTATTTATGATACAACAGATGGCATGCCTAGATTCTATGCTTTAATCAGAAGATTTCTCTCTCCTGGATTCAAGCTGCGGATAACATGGTTTGAGCCACATCCAGTTGACAATGATGAAATCAACTGGGTAAATAAGGAAATGCCTGTAGCTTGTGGGAAATATAAACTTGGTAACACTGAAATCATTGATGATCATCTGATGTTCTCTCATCTGGTTACGTGTGAAAAGATTGGCCACAATACTTGTAAAGTGTATCCTAGAAAGGGAGAAACTTGGGCCCTTTTTAGAAATTGGGATATCAAATGGTACATGGATGCAGAATCTCATAAGCAGTATGAATTTGAGTTTGTTGAAATCTTGTCAGATTATGTTGAAGGTGAGGGTGTATATGTTGCATACTTAGATAAGCTGAAAGGGTTTGTCAGTCTCTTCTTTCGAAATACAAAAGAAGATAGCCGGTCATTTCAAATTCCACCCAGGGAATTATTTAGATTCTCTCACAGGGTTCCATCTTTTAAAATGACTGGTCAGGAAGGAGTAGGTGTTCATATAGGATCTTATGAACTTGATCCTGCATCATTGCCGGTGAATCTTGAGGAGATTGCTGTTCCTGAAAATTTTGATGTGAAGATTGGTCATAGTTCATCTGGCAGTGAGAATGCAAGATCTTCAGAAAGATTAAATCCCCCGATGACATCTGATGGAGATGTATCTAATCCCAAGGTTAATTTGGAAAGAAGCAATTTGGCTGAAAACAAGGACTCTGTTAATGATATTGATGATTGTCATGCTCCTCCAGCTTCTACCCTAGAAGCTATTGAAATTCCAGATGCTCAATTCTTCAATTTTGATGCTGGGAAGTCCAATGAAAAGTTTCAAATTGGTCAGATTTGGGCATTTTACAGTGATGAGGATGGATTGCCAAAATACTACGGTCGGATTAATAGGATTGAGACTAGCCCAGATCTTGAATTGCATGTTTCTTGGCTTACTTGCTGCTGGCTACCAGAGAATACCACTAAATGGGAAGACAAAGATATGCTTATTTCCTGTGGCAGATTTAAAGTTATGAAAACAGTTGAATTTCGCAGTGTTTATACTGACACCTCTTCTATTTCACATCAAGTGCATGTTGAGGCTGTTGGTAAGAATAAGAATTACGCCATCTTTCCAAGGAAAGGTGAAGTTTGGGCATTATATAGAAAATGGTCAAATAAAATCAAATGTTCTGACTTGAAAAATTGGGAGTATGACATAGTGGAAGTTCTTGAAGAAACTGATTTGTTTATAAATGTTCTAGTTTTGGAGTTCGTTAGTGGTTTTAGTTCCATTTTGAGGGGCAAGTCAAATGAAGGATCATCTGTCAACCTGAGAATACCCAGAAAAGAGTTGCTCAGGTTCTCCCACCAAATACCAGCTTTCAAACTGACAGAAGAGCATGGCAATCTGAGAGGCTGCTGGGAACTTGATCCAGGGGCGCTACCAATCCATTATTATGCCTCGAGATGA 2982 0.4038 MDCNKEEALRAKDIAEKKMESRDFIGARKFALKAQQLYPDLENIAQMLVVCDVHCSSEQRLFGNEMDWYEILQLEQTANDATIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDRDKRSKYDIKRRVSMNKTAMSSHNPPKVPMNFNSATKTNVKPNFTNLNSQQQQQYRQPVQQQQQYRQPVQLQQNGGRPTFWTICPFCSVKYQYYREVLNKSLRCQHCSRPFIAYDVGWKGTSSATNSSQQPFGQQKDGLNHDASRVGVGSQGNLHAEKSNTGPYEKKGPIDVSEKPHGKRKRNQVAESNQSSGFTSSTDSEGDMAVGEDGFPGVENHSTYREEQPRRSARQKHKVSYKENVNDNDDDTLRPSKNSKESGSPCGDGESLGETTKMNDQNGLAANLKVEHKKVKQKQDFHSTESLHNRNEETKRVRGNEAVEGLKQMNETSVHFSPVSPSKAIPNAYVYPDAEFSDFDKDKKEECFAAGQIWAIYDTTDGMPRFYALIRRFLSPGFKLRITWFEPHPVDNDEINWVNKEMPVACGKYKLGNTEIIDDHLMFSHLVTCEKIGHNTCKVYPRKGETWALFRNWDIKWYMDAESHKQYEFEFVEILSDYVEGEGVYVAYLDKLKGFVSLFFRNTKEDSRSFQIPPRELFRFSHRVPSFKMTGQEGVGVHIGSYELDPASLPVNLEEIAVPENFDVKIGHSSSGSENARSSERLNPPMTSDGDVSNPKVNLERSNLAENKDSVNDIDDCHAPPASTLEAIEIPDAQFFNFDAGKSNEKFQIGQIWAFYSDEDGLPKYYGRINRIETSPDLELHVSWLTCCWLPENTTKWEDKDMLISCGRFKVMKTVEFRSVYTDTSSISHQVHVEAVGKNKNYAIFPRKGEVWALYRKWSNKIKCSDLKNWEYDIVEVLEETDLFINVLVLEFVSGFSSILRGKSNEGSSVNLRIPRKELLRFSHQIPAFKLTEEHGNLRGCWELDPGALPIHYYASR* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04820 993 MobiDBLite consensus disorder prediction 703 733 - -
Rops2g04820 993 SUPERFAMILY Chaperone J-domain 62 133 IPR036869 -
Rops2g04820 993 Pfam Domain of unknown function (DUF3444) 763 970 IPR024593 -
Rops2g04820 993 Pfam Domain of unknown function (DUF3444) 464 669 IPR024593 -
Rops2g04820 993 Gene3D DnaJ domain 54 148 IPR036869 -
Rops2g04820 993 MobiDBLite consensus disorder prediction 335 373 - -
Rops2g04820 993 Pfam DnaJ domain 67 128 IPR001623 -
Rops2g04820 993 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 986 - -
Rops2g04820 993 MobiDBLite consensus disorder prediction 242 394 - -
Rops2g04820 993 MobiDBLite consensus disorder prediction 305 322 - -
Rops2g04820 993 MobiDBLite consensus disorder prediction 136 191 - -
Rops2g04820 993 MobiDBLite consensus disorder prediction 242 257 - -
Rops2g04820 993 PRINTS DnaJ domain signature 69 87 IPR001623 -
Rops2g04820 993 PRINTS DnaJ domain signature 123 142 IPR001623 -
Rops2g04820 993 PRINTS DnaJ domain signature 87 102 IPR001623 -
Rops2g04820 993 PRINTS DnaJ domain signature 103 123 IPR001623 -
Rops2g04820 993 CDD DnaJ 67 120 IPR001623 -
Rops2g04820 993 MobiDBLite consensus disorder prediction 411 431 - -
Rops2g04820 993 MobiDBLite consensus disorder prediction 280 304 - -
Rops2g04820 993 SMART dnaj_3 66 123 IPR001623 -
Rops2g04820 993 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04820 Rops-Chr2 87304789 87309371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04820 4 236 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.310 4.21e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04820 - - gmx:100795200 1454.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04820 2 87304789 87309371 Rops11g00933 11 13239035 13244071 PCT