Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04807 ATGGTTTCATTGGTTGCCAGTGGTAGCAGTCAAATGTCTCCTTCAGTTTCTGTCCAAGAAAAAGGAAGTAGGAACAAGAGAAAATTCAGGGCTGATCCACCTTTAGGGGAGCCAAATAAGATTAATCCTGCACCTCAACATGAATGCCTCAGTTATGAATTCTCTGCTGAGAAGTTTGAAATTACCCCAGGTCATAGGCAAGTCGCTGCTTGTGACCTGTGCAGTGTTAGCCACGATCATCCTGATGGATTGAAGCTTGACCTTGGATTGTATAGTCCTGGAAGTTCATCTGAGGTTAGGCCTAGTCAACCTAAGGAAGAACTCGAGGCAGATGAATTCAATGATGCTGATTGGAGTGATCTCACAGAAGCTCAGTTGGAAGAACTTGTCTTGAGTAATTTAGATACCATTTTCAAGAGTGCAATTAAAAAAATTGTTGCGTGTGGCTATACTGAAGAAGTTGCTACTAAGGCCATCTTAAGGTCCGGCATCTGTTATGGATGTAAAGACACTGTGTCTAATATAGTGGATAATACTTTGGCATTTCTTAGAAATGGCCAAGATATTGATCCTTCACGAGAGCACTATTTTGAAGATTTAGTGCAGCTTGAGAAGTATATCTTGGCTGAATTGGTTTGTGTTCTTCGAGAGGTTAGGCCATTCTTCAGTACAGGGGATGCAATGTGGTGTTTGTTAATTTGCGACATGAATGTGTCACATGCTTGTGCAATGGACTGTGACCCTATGAGTAGTTTAGGTAGTGATGGTACTGCTGATGGCTGTTCATCTAGCCAAGCAGAATCGCAATCAAAAGTGGAAACTAAAGTTCCTGAATTAAGTCTTCCAAGTCCTTGTAAATCAATTCCTGCAGGTTCCCATAATTCTCAATCTAAGAAACCCTTTGTGGCAGGAATTCCAGGTGCAAACAACCTAAAAAATTCTCAAACTATTGGTGGAATATCGGAGAATGAGAGTGCCAGTTGTGCATCTGATTGTATTGACAAAGCATTTACTGCCGGAACATCTAAATCTCCCCTAGTGGAAGAAAAGTGCGGAAGTGGTAGAAAGGTCCATTCTGGTAACACCAAGAGGGACTACTTTCTTCGACAGAAGTCATTTCATGTAGAAAAAAGCTATCGGACTTATGGATCTAAAGGGTCCTCAAGAGGAGGGAAGCTGAGTGGCGTGGGTGGTTTGATCTTGGATAAAAAACTTAAATCCGTATCAGAATCTTCTACCATAAACTTAAAGAGTGCATCCTTACAGATAAGTAAGGCAATGGGAGTTGATGTGCCTCAAGACAATCTTAATGTTAATTTCTCATCTAATGCTGGACCATCAACCCCCACTGCATTTAGCCTGGATTCTGCTGATGCTGTTTCTAGATCAACCAATACTTCATATGCAGTATATGCAGCAAATACTTTACCTGCATTCAGTAGCCCACCTTCATTATCAGCTACTGACACAGATCTTTCTCTTTCATTGTCTTCAAAAATCAAGCCTTCTACAGAACCTGTCTGCTGCAATAATGAGGCATCCAATAGTAGTTATATGGGGATAGCATATGACAAGTCCCTGGGGCAGTGGATACCCCAAGATGGGAAGGATGAGATTATTTTGAAGCTGGTTCCAAGGGTTCGGGAGCTGAAAAATCAGCTTCAAGAATGGACAGAATGGGCCAATCAGAAGGTTATGCAGGCTGCTCGTCGGCTGAGTAAGGACAAGGCTGAGCTTCAGACACTAAGGCAAGAGAAAGAGGAAGTTGAACGTCTTAAGAAGGAGAAGCAATCTCTGGAGGAAAATACCATGAAGAAGCTTTCCGAGATGGAAAATGCCTTGTCTAAAGCTAGTGGGCAGGTAGAGCGAGCTAATGCTGCTGTCCGGAAGCTTGAGGTGGAGAAGGCTGCACTGAGGAGAGAGATGGAGGCTGCTAAGCTGCGTGCTACAGAAACTGCTGCAAGCTGTCAAGAGGTCTCAAGGAGAGAAAAGAAGACCCAAATGAAGTTTCAGTCATGGGAAAAACAGAAATCCTTGTTTCAGGGAGAGCTAATGATTGAAAAACGAAAACTGGCACAGCTGCTGCAGGAATTAGAGCAAGCTAGAATGCAACAGGAGCAATCTGAGGCTAGATGGCAGCAGGAAACAAAGGCAAAAGAAGAACTTCTTCTCCAGGCCAGTTCTATAAGGAAAGAAAGAGAACAAATTGAGGCGTCAGAAAAATCCAAGGAGGATATGATCAAATTGAAAGCAGAGAGGAATCTACAAAGATACAGAGATGATATCCGTAAACTTGAAAAGGAAATTGCCCAACTGAGACTGAAGACTGATTCTTCTAAAATTGCTGCACTGAGGATGGGCATTGATGGAAGCTATGCCAGCAGATGCATGGACATGAAGAATGGCAGTGCTCTAGATGAACCCCGGACTTCTTTTATATCAGAACTAGTCATTGATTACTCAGTGACAGGTGGTGTGAAAAGGGAACGGGAATGTGTGATGTGCCTTTCAGAGGAGATGTCTGTTGTATTCCTTCCATGTGCTCATCAGGTTGTTTGCACAACATGCAATGAGCTCCATAAGAAACAAGGTATGCGAGATTGTCCTTCTTGCAGGAGCCCCATCCAGCAGCGGATTGCAGTACGTTTTCCACGTACTTAA 2661 0.4299 MVSLVASGSSQMSPSVSVQEKGSRNKRKFRADPPLGEPNKINPAPQHECLSYEFSAEKFEITPGHRQVAACDLCSVSHDHPDGLKLDLGLYSPGSSSEVRPSQPKEELEADEFNDADWSDLTEAQLEELVLSNLDTIFKSAIKKIVACGYTEEVATKAILRSGICYGCKDTVSNIVDNTLAFLRNGQDIDPSREHYFEDLVQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDCDPMSSLGSDGTADGCSSSQAESQSKVETKVPELSLPSPCKSIPAGSHNSQSKKPFVAGIPGANNLKNSQTIGGISENESASCASDCIDKAFTAGTSKSPLVEEKCGSGRKVHSGNTKRDYFLRQKSFHVEKSYRTYGSKGSSRGGKLSGVGGLILDKKLKSVSESSTINLKSASLQISKAMGVDVPQDNLNVNFSSNAGPSTPTAFSLDSADAVSRSTNTSYAVYAANTLPAFSSPPSLSATDTDLSLSLSSKIKPSTEPVCCNNEASNSSYMGIAYDKSLGQWIPQDGKDEIILKLVPRVRELKNQLQEWTEWANQKVMQAARRLSKDKAELQTLRQEKEEVERLKKEKQSLEENTMKKLSEMENALSKASGQVERANAAVRKLEVEKAALRREMEAAKLRATETAASCQEVSRREKKTQMKFQSWEKQKSLFQGELMIEKRKLAQLLQELEQARMQQEQSEARWQQETKAKEELLLQASSIRKEREQIEASEKSKEDMIKLKAERNLQRYRDDIRKLEKEIAQLRLKTDSSKIAALRMGIDGSYASRCMDMKNGSALDEPRTSFISELVIDYSVTGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHKKQGMRDCPSCRSPIQQRIAVRFPRT* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04807 886 Coils Coil 681 715 - -
Rops2g04807 886 Pfam Zinc finger, C3HC4 type (RING finger) 829 877 - -
Rops2g04807 886 PANTHER OS05G0141500 PROTEIN 11 881 IPR046934 -
Rops2g04807 886 ProSiteProfiles Zinc finger RING-type profile. 832 872 IPR001841 -
Rops2g04807 886 MobiDBLite consensus disorder prediction 1 20 - -
Rops2g04807 886 Coils Coil 719 782 - -
Rops2g04807 886 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 823 882 IPR013083 -
Rops2g04807 886 SUPERFAMILY RING/U-box 827 879 - -
Rops2g04807 886 CDD RING-HC_MIP1-like 827 881 - -
Rops2g04807 886 Pfam Family of unknown function (DUF6592) 133 244 IPR046527 -
Rops2g04807 886 Coils Coil 565 648 - -
Rops2g04807 886 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04807 Rops-Chr2 87099033 87102755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04807 832 881 C3H Transcription Factor Family AT1G73950 44.000 8.32e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04807 - - gsj:114420104 1331.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04807 2 87099033 87102755 Rops11g00953 11 13590864 13595094 PCT