Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04806 ATGGGTGGTGTCCATTGCAAGTGTTGCTGTGGCAACCCTTCTTCATCAGATGGTGGTTCTGGGGACTATCATGGTCATAAGAAGAACATAGTCACTCAGAAATCACTGGAGTATGTTCCTGTTCCTTCCCACAACTTCATTTTGGAATACACTTTTCTCACACAGAGGGGATACTATCCTGACTCACCTGATAAAGAAAACCAAGATAGTTTCTGCATTAAGACTAATATTCAAGGTAACCCCAATATCCATTTTTTTGGTGTCTATGATGGGCATGGTCAATTTGGTGGACAGTGTTCGAACTTTGTTAAGGATAGGTTGGTAGAAAAATTAGAAAATGACCCTGCATTGTTGGAGGACCCCGTTCAAGCTTACACTTCTGCATTCTTGACAACGAATCAAGAAATGCGTGCTTGTGAGATTGATGATTCTATGAGTGGCACTACTGCAATTACGGTACTTGTTATCGGAGACCATATTTATGTTGCTAATGTTGGTGATTCAAGAGCTGTGCTAGCTGTTAAGGACGGGAACCACATTATTGCTGAGGATTTGTCCTCTGATCAGACACCATTTCGGAGAGATGAATATGAGAGAGTGAAAATTTGTGGGGCAAGGGTGTTGAGTGTTGATCAAGTGGAAGGGCTCAAGGATCCGAATATCCAGCATTGGGGTGATGAAGAGAGTCGGGGTGGTGATCCCCCAAGATTGTGGGTTCCGAATGGGATGTATCCTGGAACTGCATTTACAAGGAGCATAGGGGATAGTTTGGCGGAGACTATTGGTGTTGTTGCTGTTCCAGAGGTGTTAACAGTTCAGCTGACACCTAATCACCTTTTCTTTGTTGTTGCAAGTGATGGCGTGTTTGAATTCATGTCAAGCCAAACCGTTGTTGATATGGCCGCAAGGTATACAGATCCTCGCGATGCATGTGCAGCTATTGCTGAAGAGTCATATAAACTATGGTTGGAACTTGAGAACCGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCCTCTCTAATTCAAGTACACCTGGAGTTGAATCAGGTGAGATCAATGTTGGAACTGCCATGGGGTCCAGGACAGGAACTTCTGAGATATCTGCTACCACTGGATCTGATGTTTTTCGTTCTATGTGGAGCAGTTTCTCTGATTTACAATCCTGTCAGCATACGGCTTCAATTAGGAGCCATGCCACAGTTCACTCCCCAGTATTGACTGAGAAGAGAGACTTTATGGAAGCTTCACCAAGTCTCCTTGTAGTTTCTTGCTGCTTAAGGTTGCTGGTATGA 1302 0.4347 MGGVHCKCCCGNPSSSDGGSGDYHGHKKNIVTQKSLEYVPVPSHNFILEYTFLTQRGYYPDSPDKENQDSFCIKTNIQGNPNIHFFGVYDGHGQFGGQCSNFVKDRLVEKLENDPALLEDPVQAYTSAFLTTNQEMRACEIDDSMSGTTAITVLVIGDHIYVANVGDSRAVLAVKDGNHIIAEDLSSDQTPFRRDEYERVKICGARVLSVDQVEGLKDPNIQHWGDEESRGGDPPRLWVPNGMYPGTAFTRSIGDSLAETIGVVAVPEVLTVQLTPNHLFFVVASDGVFEFMSSQTVVDMAARYTDPRDACAAIAEESYKLWLELENRTDDITIIIVQIKGLSNSSTPGVESGEINVGTAMGSRTGTSEISATTGSDVFRSMWSSFSDLQSCQHTASIRSHATVHSPVLTEKRDFMEASPSLLVVSCCLRLLV* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04806 433 CDD PP2Cc 65 339 IPR001932 -
Rops2g04806 433 SMART PP2C_4 45 337 IPR001932 -
Rops2g04806 433 ProSiteProfiles PPM-type phosphatase domain profile. 49 339 IPR001932 -
Rops2g04806 433 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 44 341 - -
Rops2g04806 433 Gene3D - 48 341 IPR036457 -
Rops2g04806 433 SUPERFAMILY PP2C-like 36 341 IPR036457 -
Rops2g04806 433 Pfam Protein phosphatase 2C 68 318 IPR001932 -
Rops2g04806 433 ProSitePatterns PPM-type phosphatase domain signature. 85 93 IPR000222 GO:0043169
Rops2g04806 433 PANTHER PROTEIN PHOSPHATASE 67 338 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04806 Rops-Chr2 87090378 87093716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04806 1 344 PP2C-type Phosphatase Gene Family AT3G06270 72.334 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04806 - - gmx:100797866 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04806 2 87090378 87093716 Rops2g04806 2 87090378 87093716 ECH
Rops2g04806 2 87090378 87093716 Rops11g00956 11 13646427 13650452 PCT