Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04802 ATGGCTTCCCCTTCTCCTCCAGATCCACCCTCCGCCGTCCCCCTCGCCCTCCCTGTCCCAACCTCCTCTCGCCGCCTTCCTCCGCCCTGCTGGTCCCCTGATGAAACCCTTGCATTGATTGATGCTTACCGTGACAAGTGGTACTCTCTTGGCCGTGGAAACCTCAAAGCCCCCCACTGGCAAGAGGTTGCTGACGCTGTCTCACAGCGCTGCCCTAATGCCTCACCACCCAAAACCCCCGTTCAGTGCCGTCATAAGATGGAGAAGCTCCGAAAACGGTACCGTACTGAGATCCAACGCGCTCGTTCACTCCCTGTTTCACGCTTCACCTCTTCTTGGGTCCATTTTAATCTCATGGATTCCATGGAGAAAGGTCCCTCACCTCCCAAACCCGACAACGATTCTGACAGCCATGATGAGGACGATGAAGATCAAGAATTGTACGAGGAAATCAAGAATGGCCATGGATCTAACACCAGGAGCTTGAACAAGTTGTATAGCAACAGCAATGGGTTTAGGATCAGGATTCCGACTGGGTCCAACGTGGCGCAAAGTGGGTCAAAGTTGTTTGGGAAGGTTGGGAATCTGAATCAAAACCCTAATTTGAGTTCTGATTATGGGGCGAGGGTGTTGGGGAAGAAGAAGGAGAGAGACCCTGTGAGTGAGGTGGTGACTGCGATTAAGGTTTTGGGAGATGGGTTTGTGAGGATGGAACAGATGAAGATGGAGATGGCGAGGGAAATTGAAACCATGAGGATGGAGACGGAAATGAAGCGCACTGAGATGATTCTTGAGTCTCAACAGCGAATTGTGGAGGCATTTGCCAAGGCAGTTTCGGATAAGAACAAGAAAGCTAAGAGAATTCCCTCACCTCAACAACAGCCTTAA 888 0.5124 MASPSPPDPPSAVPLALPVPTSSRRLPPPCWSPDETLALIDAYRDKWYSLGRGNLKAPHWQEVADAVSQRCPNASPPKTPVQCRHKMEKLRKRYRTEIQRARSLPVSRFTSSWVHFNLMDSMEKGPSPPKPDNDSDSHDEDDEDQELYEEIKNGHGSNTRSLNKLYSNSNGFRIRIPTGSNVAQSGSKLFGKVGNLNQNPNLSSDYGARVLGKKKERDPVSEVVTAIKVLGDGFVRMEQMKMEMAREIETMRMETEMKRTEMILESQQRIVEAFAKAVSDKNKKAKRIPSPQQQP* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04802 295 SMART 118neu2 38 127 IPR006578 -
Rops2g04802 295 MobiDBLite consensus disorder prediction 120 145 - -
Rops2g04802 295 Pfam Myb/SANT-like DNA-binding domain 29 122 IPR044822 -
Rops2g04802 295 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 9 280 IPR044823 -
Rops2g04802 295 MobiDBLite consensus disorder prediction 1 27 - -
Rops2g04802 295 Coils Coil 84 104 - -
Rops2g04802 295 FunFam Trihelix transcription factor ASIL2 31 96 - -
Rops2g04802 295 Gene3D - 31 96 - -
Rops2g04802 295 ProSiteProfiles Myb-like domain profile. 31 91 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04802 Rops-Chr2 87007184 87008611 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04802 30 122 Trihelix Transcription Factor Family AT3G14180 38.710 4.18e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops2g04802 Myb_DNA-bind_4 2.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04802 - - vun:114179736 400.979