Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04791 ATGATTGCAAAGGAAAACCTAGTAGATACTGAACTGGCAATGAATAATGCTAGTGGGGAAGAGGAAATAGAGTTTGCCTGTGAACCATACATAGGCTTAGAATTTGATTCAGCAGATGATGCGCTTAAGTTTTATGTCTCATATGCAAAGCATACAGGATTTAAAGTTCGGATTGGTCAGCTGTATCGATCAAGAACTGATGGGTCAGTTTCTTCTCGAAGATTTGTGTGCTCTAAGGAGGGTTATCAGCTCAGTTCAAGATCAGGTTGTCCAGCATTCATAAGGGTACAGAGACGCGATTCTGGAAAGTGGGTTATTGATCATTTCTTGAAGGGCCACAATCATGATCTTGAAACTGAAAGTGAAAATTGCTCTCCAACTTTGCAGCAGAAGGGTGCCACAACTATCAATTCTTTTGCTAATGTGTCCCACAGAAAAAGGAAGAAATTTCTTGAAGAAGCTGAGGAAGAACCATCTTGTCCCTTTGGCATTATTAATTTCAAATGCTCAAGAAAAGAAAGAGATGAAGGACATTCCAGGATTGAACCATATGTAGGTCAAGAATTTAGTTCAGCTAATGAAGCTTACCAATTTTATCATTCATATGCAGCATTTGTGGGTTTTTCAATTCGAATTGGTCAATTGTTTCGTTCTAAGAATGATGGGTTGATTACATCCCGTCGATTTGTGTGCTCAAAAGAAGGTTTCCAGCACCCTTCAAGAGTTGGTTGTGGGGCTTATTTGAGAATTAAGAGACAACCATCAGGAAAGTGGGTGGTGGACCGTCTCCACAAAGATCATAATCATAATCTGGACTCTGAAAAAGAATGTAGGGCAAAAAGTCTTCCTGATTCTAGTATTTTGACTGAGGAGGTAGATGCTGGATTGTTAAATGGTGACTTATTTCGGATTGATAACTACCCCGTCCCAAGAAGAGGTAGACAAAATGACATTAAAAGTGATTGGTACACTGTGCTTTTAGAATATTTCCAATCAAGACAAGCTGAAGATACAGGATTCTTTTATGCAGTGGAAGTTGATAATGGTAATTGCATGAGCATATTTTGGGCTGATGGCAGATCTAGATATTCATGTAGTCAGTTTGGTGATGTCCTTGTTTTAGACACATTTTATCGAAGAAGTGTCTATTTGGTACCTTTCGCTACCTTTGTTGGCATTAACCATCACAAGCAACCTGTGCTTCTTGGATGTGCTCTAATTGCTGATGAATCTGAGGAGTCCTTCACCTGGTTGTTTCAGACCTGGCTGAGGGCAATGTCTGGCCGGCAGCCTCTGTCAATAATAGCTGATCAAGACATTGCAATCCAGAAGGCAATAGCAAAAGTCTTTCCAGCAACCCATCATCGCTTTTCGTCTTGGCAGATTAAGGCAAAGGAACAAGAGAATGCGGGTCTGATGGGTAATGGATTTTTTAATGATTATGAAAAGTGGGTTTACCAGAGTCAGACTGTTGATGAATTTGACACCGCATGGAATGCCTTACTCAACAAATATGGATTGAAGGATAATGCTTGGTTAAAAGAAATGTATGAGAAGCGTGCATCTTGGGTTCCATTATATTTAAGGGGCAAATTTTTTGCTGGCATTCTCATTAATGAAAGTGTCGGTTCGTTCTTTGGTGCACTTTTAAATGCCCAAACCCCTGTCATGGAGTTCATTTCACGGTATGAAAGAGGTCTTGAGCGACGCCGTGAGGAAGAAAGAAAAGAGGATTTTAATACTTCCAATTTTCAACCCATTTTGCAAACAAAAGAACCGGTAGAAGAACAATGTAGAAGGCTTTACACTCTTGCCATATTCAAAGTATTTCAGAAAGAGCTTTTGCAATGCTATAGTTTTCTCGGGTTTAAAATTTATGAAGAAGGGGGCCTTAGCAGATATTTAGTGCGGAGGTGTGGGAATGATATGGAGAAGCATGTAGTTACATTTAGTGCACCCGATCTAAGCATTAGTTGTAGCTGTCAGATGTTTGAATTTGAAGGTGTACTTTGTAGACACGCTTTAAGGGTTTTGCAAATATTGGAATTAAGAGAAGTTCCATCCCGCTACATCTTACACAGATGGACAAGAAATGCTGATGATGGTGTTTTTCCAGACATTGAATCCTGGAGTAACTCTAAGGAACTCAGGAATTTTATGCTATGGAGCCTAAGAGAAACTGCATCTAGGTACATAGATGCTGGGGCAACATCTATTGAAAAGTATAAACTTGCCTATGAGATTTTGCGAGAGGGTGGGAGGAAGCTATGTTGGCACAAGTGA 2283 0.399 MIAKENLVDTELAMNNASGEEEIEFACEPYIGLEFDSADDALKFYVSYAKHTGFKVRIGQLYRSRTDGSVSSRRFVCSKEGYQLSSRSGCPAFIRVQRRDSGKWVIDHFLKGHNHDLETESENCSPTLQQKGATTINSFANVSHRKRKKFLEEAEEEPSCPFGIINFKCSRKERDEGHSRIEPYVGQEFSSANEAYQFYHSYAAFVGFSIRIGQLFRSKNDGLITSRRFVCSKEGFQHPSRVGCGAYLRIKRQPSGKWVVDRLHKDHNHNLDSEKECRAKSLPDSSILTEEVDAGLLNGDLFRIDNYPVPRRGRQNDIKSDWYTVLLEYFQSRQAEDTGFFYAVEVDNGNCMSIFWADGRSRYSCSQFGDVLVLDTFYRRSVYLVPFATFVGINHHKQPVLLGCALIADESEESFTWLFQTWLRAMSGRQPLSIIADQDIAIQKAIAKVFPATHHRFSSWQIKAKEQENAGLMGNGFFNDYEKWVYQSQTVDEFDTAWNALLNKYGLKDNAWLKEMYEKRASWVPLYLRGKFFAGILINESVGSFFGALLNAQTPVMEFISRYERGLERRREEERKEDFNTSNFQPILQTKEPVEEQCRRLYTLAIFKVFQKELLQCYSFLGFKIYEEGGLSRYLVRRCGNDMEKHVVTFSAPDLSISCSCQMFEFEGVLCRHALRVLQILELREVPSRYILHRWTRNADDGVFPDIESWSNSKELRNFMLWSLRETASRYIDAGATSIEKYKLAYEILREGGRKLCWHK* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04791 760 Pfam SWIM zinc finger 656 679 IPR007527 GO:0008270
Rops2g04791 760 SMART 26again6 657 684 IPR006564 GO:0008270
Rops2g04791 760 ProSiteProfiles Zinc finger SWIM-type profile. 646 682 IPR007527 GO:0008270
Rops2g04791 760 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 17 126 IPR031052 GO:0006355
Rops2g04791 760 Pfam FAR1 DNA-binding domain 197 271 IPR004330 -
Rops2g04791 760 Pfam FAR1 DNA-binding domain 43 118 IPR004330 -
Rops2g04791 760 Pfam MULE transposase domain 371 464 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04791 Rops-Chr2 86785380 86788472 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops2g04791 MULE 7.1e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04791 - - gmx:100816656 1286.94