Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04776 ATGTTCTCTCTCGTGCCCCTTCACGTAGTTTCTCTCATACCCTTCACGTCTCTCTGTCCAGCCACCACCCTCATCCGTCGGCCACACCGCCGGCGACCACCGCTGCCACCACCATCGGTGACCACCGCGGCCACCACCGCCGGGAAAACAGCACCGGCGCCGAGGCTTCTCTTCTCTGTTGTGACCATGGTTAGAGTTAGTGTATTGAATGATGCTCTGAAGAGCATGTACAATGCTGAGAAAAGAGGCAAGCGCCAAGTCATGATCAGGCCATCCTCCAAAGTCATCATCAAATTCCTTTTGGTGATGCAGAAGCATGGATACATTGGAGAGTTTGAATATGTTGATGACCATAGGGCTGGCAAAATCGTGGTTGAATTGAATGGTAGACTGAATAAGTGTGGAGTTATTAGTCCCCGTTTTGATGTTGGTGTCAAAGAAATTGAAGGTTGGACTGCTAGGCTTCTGCCCTCAAGACAGTTTGGGTATATTGTGTTGACCACCTCTGCTGGCATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAGGTCCTGGGCTTCTTTTACTAG 579 0.4974 MFSLVPLHVVSLIPFTSLCPATTLIRRPHRRRPPLPPPSVTTAATTAGKTAPAPRLLFSVVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04776 192 Gene3D - 63 131 - -
Rops2g04776 192 MobiDBLite consensus disorder prediction 26 48 - -
Rops2g04776 192 Pfam Ribosomal protein S8 69 192 IPR000630 GO:0003735|GO:0005840|GO:0006412
Rops2g04776 192 FunFam 40S ribosomal protein S15a 63 131 - -
Rops2g04776 192 Gene3D - 132 192 - -
Rops2g04776 192 SUPERFAMILY Ribosomal protein S8 66 192 IPR035987 GO:0003735|GO:0005840|GO:0006412
Rops2g04776 192 Hamap 30S ribosomal protein S8 [rpsH]. 64 192 IPR000630 GO:0003735|GO:0005840|GO:0006412
Rops2g04776 192 ProSitePatterns Ribosomal protein S8 signature. 162 179 IPR000630 GO:0003735|GO:0005840|GO:0006412
Rops2g04776 192 FunFam 40S ribosomal protein S15a 132 192 - -
Rops2g04776 192 PANTHER 40S RIBOSOMAL PROTEIN S15A 63 191 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04776 Rops-Chr2 86527622 86532928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04776 63 192 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 97.692 4.01e-94 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04776 K02957 - thj:104809034 261.922