Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04768 ATGACTATTTTCTCAGCCATCTGCAAGCCCGTAGTGACTTTCCAACCAGCACTCATCACCATGGATCCCTTGTTCCATCATCGTAAGGACAAGGTAGTTGTCATCATGGGAGCCACTGGAACCGGAAAGTCTAAGCTAGCCATAGACTTAGCAACCCATTTCCCTCCCGCTGAGGTTGTCAATTCTGACAAAATGCAACTTTACAAAGGCCTTGACATAACAACCAACAAAGTTACCGAGGAAGAGTGCCGTGGGGTCCCACATCATCTCTTAGGCATGGTTGATCCTAACACCAATTTCACTGCCAACGACTTTTGTCATCAAGCTTCTCTGACTATTGGTTCCATCCTGGGTAGGGATGGGCTACCCATCATTGCTGGTGGGTCCAATTCCTTCATTGAACAATTGATCAACCATCATCCTGAGTTTCGGTTAAGGTATGAGTGTTGCTTCCTCTGGGTTGATCTCTCTCTCCCCGTGCTTCATTCCTCTTTGTCGGCACGTGTTGATCGCATGATTGAAGCTGGACAAGTTGAAGAGGTTCGTGAATTCTTCGACCCATCCGAGGATTATTCAAATGGGATTAGAAGAGCTATTGGGGTTCCTGAATTTGATGAGTTTCTAAGAGCAGAAGCTAAAGGGGTTGATGAAAGAATTAAAAAGAAGCTCCTTGAAGCTGCCATTGCTACAATCAAGATCAATAACTGCAAGCTAGCAAACCGACAGCTTCAGAAGATTCATCGACTTTACAATATGTGGAAAAGGAATATGCACCGTCTTGATGCCACTGAGGTTTTTCTCAAGAGTAATTCTGAGGAAGCTTGGGAGGATCATGTGTTTGCAAAGAGTCGCAGAATTGTTCACAAGTTTCTGTACGAGGAAACACATGTTAATGCTGTAATTGCTCCTGCAACCCCTTCAGCTATGGCCACGGTAACCCATTAG 945 0.4497 MTIFSAICKPVVTFQPALITMDPLFHHRKDKVVVIMGATGTGKSKLAIDLATHFPPAEVVNSDKMQLYKGLDITTNKVTEEECRGVPHHLLGMVDPNTNFTANDFCHQASLTIGSILGRDGLPIIAGGSNSFIEQLINHHPEFRLRYECCFLWVDLSLPVLHSSLSARVDRMIEAGQVEEVREFFDPSEDYSNGIRRAIGVPEFDEFLRAEAKGVDERIKKKLLEAAIATIKINNCKLANRQLQKIHRLYNMWKRNMHRLDATEVFLKSNSEEAWEDHVFAKSRRIVHKFLYEETHVNAVIAPATPSAMATVTH* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04768 314 Gene3D - 29 291 IPR027417 -
Rops2g04768 314 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 158 257 - -
Rops2g04768 314 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 29 291 IPR039657 -
Rops2g04768 314 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 188 IPR027417 -
Rops2g04768 314 Pfam IPP transferase 145 244 - -
Rops2g04768 314 Pfam IPP transferase 66 140 - -
Rops2g04768 314 FunFam Adenylate isopentenyltransferase 5, chloroplastic 158 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04768 Rops-Chr2 86408738 86410446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04768 146 295 C2H2 Transcription Factor Family AT2G27760 32.955 6.24e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04768 K10760 - gmx:100778430 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04768 2 86408738 86410446 Rops11g00982 11 14015102 14016360 PCT