Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04763 ATGGGTGTTTCATGGAGTAACAGTAACAGAAGAAGAAACAATTACCAGCATCATCATCATCCTCATCCACCACCTCCACATCTTCCACCCCCTTACTATTACTCTCATCATCCACCACCACCACCACCTCCCCCACTCCTCCCACCTCCCCAAGGTTACTTTTTTACCTCTACTAACCCTTCTTCTACCTCTGCCTATGCCCCTCCTCCACCTCCACCTCCTCACTATTACTCTAATTGTCTTCATCATCAACCCTTTTATGCAAATTCGGTTCCGGGTCCGGGTCAACCCGGTGTTCAACCTCCACCCTATGTTGACCATCAAACTACTAAGAAGATAAGGAATGATGTGAACTTGCATAAACATACTCTGCGCCTTGAGGTTGATGACAACAACCCTGATCACCACTTGATTTCCTTCGTTTTTGATGCCCTGTATGATGGCAGCATTACAATATTCTACTTTGTCAAAGAAGAAGAAAAATGTAGGTTTATTCCACTATTTCCTGAAGCATTTGAGCCAATCACATTCCCCTTTCAGAAAGGAGCTGGCCAGAAATTTTGTCAGCCTTCAGGAACAGGCATTGACCTAGGTTTCTTTGAGTTGGATGATCTTTCAAAGCCCTCACCTGGAGAAGATGTATTCCCCCTAGTAATATGTGCTGAAACAAGTTTGACAACTCCTTTGGCAGATGAAGAAACTCCTGGTAATTCCATACTAGATGCATCCCCTCACATGCAAATAACTCAAGCTGTCTTAGAGAAAAGCAATGGTAGTGATCCTTTCCAGGTAAAAGTAGTTAGGCAGATTTTGTGGATCAATGGTGTTCGTTATGAGCTGAGAGAGTTATATGGAATAGGAAGTTCAACAGCAGCAGATTTTGATGATAGTGATCCTGGGAAGGAGTGTGTGATATGCATGACTGAACCCAAGGACACTGCTGTCTTACCTTGCCGACATATGTGTATGTGCAGTGAGTGTGCAAAAGCTTTGCGGGTTCAATCAAATAAATGCCCTATATGCCGTCAACCTATTGAGGAACTTATAGAGATCAAGATAAACAATGGCACTCAATAA 1077 0.4327 MGVSWSNSNRRRNNYQHHHHPHPPPPHLPPPYYYSHHPPPPPPPPLLPPPQGYFFTSTNPSSTSAYAPPPPPPPHYYSNCLHHQPFYANSVPGPGQPGVQPPPYVDHQTTKKIRNDVNLHKHTLRLEVDDNNPDHHLISFVFDALYDGSITIFYFVKEEEKCRFIPLFPEAFEPITFPFQKGAGQKFCQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETSLTTPLADEETPGNSILDASPHMQITQAVLEKSNGSDPFQVKVVRQILWINGVRYELRELYGIGSSTAADFDDSDPGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQPIEELIEIKINNGTQ* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04763 358 SMART ring_2 303 341 IPR001841 -
Rops2g04763 358 MobiDBLite consensus disorder prediction 25 51 - -
Rops2g04763 358 FunFam probable E3 ubiquitin-protein ligase LOG2 287 352 - -
Rops2g04763 358 ProSiteProfiles Zinc finger RING-type profile. 303 342 IPR001841 -
Rops2g04763 358 MobiDBLite consensus disorder prediction 1 70 - -
Rops2g04763 358 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 288 352 IPR013083 -
Rops2g04763 358 CDD mRING-HC-C3HC5_MGRN1-like 301 342 IPR045195 -
Rops2g04763 358 Pfam Zinc finger, C3HC4 type (RING finger) 301 347 - -
Rops2g04763 358 SUPERFAMILY RING/U-box 302 348 - -
Rops2g04763 358 PANTHER MAHOGUNIN 31 352 IPR045194 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04763 Rops-Chr2 86314435 86317229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04763 104 358 C3H Transcription Factor Family AT3G06140 64.062 4.23e-111 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04763 - - gmx:102665712 479.559