Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04738 ATGGACAGTGAAGAACCTCCTTGTCCCTCCCCCTATCCCCGTCTATCCTCTTCTTCTTCTTCACTTCTAAAGGACATCTCCAACTTCAAAACCCCCATACGCCCCTCCCTCTCTCTCAACAAGGCCCAATCTCCCTCCACCCAATTCTTCACCGCTTCCAAACCCACCTCCACATCCCACCGCCGCCCCATCAAAGCATCAGCCGCCGCCGCCAAAAAGAAACTCAAGGCATTCCAACTGGAACAGTCCCAGTCTTCCAGAAAGGCCCAAATCAAAAAGGAACAGTCCCTCAAATCCCTAGCCAAGTCCCTCACCGTTTGGCTCAATTTCCTCCTCGAATCCCCCGCCTCCTGCGGCTGCGAGTTCCCCATCGCCGCCGCTGCCACTCCGGCTACTAATGGGAAGCGAGATAGTGCCCCGGCGAACTCTGTTGGAGTTGATTCGACGTGGCGAACTCCAAAGCGGCAGAGGAAGACGTGGTCCCGTGTTGGTGTGGAAAATGCTGTGGTGGAGTTGCCGCATTCCTCGTTTTCGCAGTTGAGGGAGTCTCTGAAGGATGTTTGTAGTTTTGATGATTTGAAGCAGCGAATGAGGGTTTATCTGAGCCTTGGAACTTGTGAAGACATCTTTCAAGTTATTACTCGAGTGACCAAGACAATTGATGGAGGAAGGCTAAATATGAAGGCTCACTGCCCGATAGTGACAGATGTTGGGTTGAAGGATAAGGCCACTAGAATCCTTATGAGTTATAATCCAATTTGGCTGCGAACTGGATTATATATAATTTTTGGTGGTGACTCCTTGGTGTTAAATGGGGATGTTGATCCTGATCAAGATGTCATATTTTTGAAGATGGTCATTGACAAGCTATTTTTTTCACATGAGGGTTTAGCAAAAGCATATGCATATAACAAGATAGTTGAAGGAGTGTATAGGTCAGGTTACTATGAGAATTTGGGTAATGTGATTTTGAAGAGAATTTTGTTACTTGTGCTCATCCTGGATAAAGTTAAATGTCAAAGTTGCCTCCCACTTGAGTATGGTATTGATGGATTGGATGGTGGTTCCCCTTTATTATTCAAAGCAGAATCCTGGATTAAATCAAGTAGTCAATTGATCCAGGAATTTCTATCATCTGATGTAATGCATGGAGAAGGCAACCTTCTAGCACATTTGGTTATTTTAGGTTACAAAGTATCTCATCAACAGGGGCCTCTTGTAGAGTATGATTTCAGGGTCAGAGATTTATTTGTTGATCTCCAAGATGGAGTAAAACTCTGTAGAGCTATTCAGCTCTTGCAACATAATTCTTCTATCCTCATGAAAATTGTAGTTCCCTCAGATACAACTAAGAAAAAATTGGCAAACTGTGGTCTTGCCCTACAATATCTTAGGCAAGCTGGAATATCACTACTTGATGAAGATGACACCATGATTGTGACAGATGACATTGTTAGTGGAGATAAAGAACTTACGCTCTCCTTGCTCTGGAATATGTTTGTTCATTTGCAGCTACCTCTTTTGGTTGATAAAGCAAGTTTAGTCGAGGAAGTTTCTAAAATTCGAGGACTCAGCACGGATCTCATAAACAGTGCAAATTCTAACTCTTTGGAATTGCTTTTGAATTGGATTCAGGCTGTTTGTGACAATTATGACTGTCCAATTGACAATTTTCATTCGCTTGTTGATGGCAAAGCAATCTGGTGCTTACTTGATTATTACTTCCAGAAGGAACTTCATTATTCCTGTTCATTGAAGGAAGTTAATAACAAAATTGGCAAGGCATCGATTATGTCAGTCAATGAATATTCAGATGCATTGTACAATTTTATCTTGTCCCAGAAGTTGACTACTTTACTGGGGAATTTTCCAGAGGTGCTTCAAATAAGTGAGCTACTTCAATATAATGGTGCTTGCAATGATCGAAGTGTGGTGATATTGCTGGTTTTCCTAGCAAGCCAATTATTTGTCAAGAAAAATGTGGATCACTTAAATTTTCATAAGCTCCTGGGTTATGACAGCCTAAGTCCAAACCATAGAAATTTGAGGATGATACAGTGCCTTTCAAGTTCTGAATCAGTACAAAAGTCTGATGCTTCAGATATGCATAGCAATGAAGATCATACAAGAAAATTCAAGGCCATCCAGGCTTGGTGGCAAGGTATGGCTGAACGAAACCATATCATGAAACCAGCTGTCTCTAATTTGCAGATATCCAGAACCACTGCATGCATCGCCAACGATACAAGAGAAAATGCTGCAAGAACAATACAGTCACATATCAGAGGATTGGTTGTACGGCGCAAGTTCCTGAAGATGGTGAATGTTGTTACCCTCTTGGAAACTGTTTTCAGAGCTTGGCTAAAAGTTAGGCAGCAGTCAGTCTGCATGATATTCACAAGCGTTCAAGTCTATGACTTTTCATGTGAAACATTGAAGCGATCAGACACATATAGGAGATATACGATGTTTTTCGTTCATAGGCATTCTTTTTTGAGGCTGAAGAGGTCAGCACAGCTTATCCAGCAAGCAGTTAGGAGTTGGCTCCATTGGAGGCATGAACAAGGATGTAGTATAAGTCCTGATCTTATGATTTCAGATACAGATACTGTTGCCACTACTGTTCAAACATTTGTTCATGGTTGGATAGCACGATCTAGATATATTCGTCAGCTAGATCAGAAAGAGAAAGCTCTAAATTTAGCCCCACAGAAAGTTATATTTGATCTTCAAACAAATGCTGCCGTTAGCATTCAGCTTGCTTGGAAAAAGTTCATATGCTGCAAGTCTACTCAGAAGCCACACTTTGCTGCATCTAAAATTCAATGTAATATCCGAAGGTGGTCCTTGAGAAAAACATTTTTAAATCAGATCCAAGCTGCTATAAAAATTCAATCTTATTTCCGAATGTGGAGATGTGTGAATGCTTTTCAGCACTTGAAATTTGCTTATAAGGCAGCTATTGTCATTCAATCTTTCTTTCGTGGATGGATTGCACGGAAGGATGCTTGTGCACTTAGAAATCACATAGTTGAAATTCAAAGGCATTGCCGTGGTTGGCTTGTGAAACGGGACTTCTTGTTCCGAAAAGATGCTGTAGTAAAGATCCAGAGTGTCATTCGAAGTCTGAAATGCCAGAAGGCTCTCTTTTGTCAGAAAGATGCTGCAATGGAGATCCAGCGCTTTATCAGAGGGCATTTAACTCGAAATCGGCTATTAGGCCGTTCTTCCCAGTTACGTGCAATCATTCCCGTTTCCTGCATTTCAAGACCATTAGGCTTTTGTAGTTTTCAATTGGAATTATTCATGCTTTCGGTTGTGAAATTGCAACGCTGGTGGAAGGGTCTCATGTTGCTTAAATTAATGAATAAGTCGGCCATTATTATTCAGTCTTGTACTCGTGGGTGGATAGCCAGACGAAAGGCCAATGTTCACAAACAAGATATTGTTGCCATCCAAGAACTTGCCGCATTGGAGATCCAGCGCTATATTAGGGGGCATTTAACTCGAAATCGGATATTAGGTGGTGCTTCTAAGCTTCGTGCAGTCGTTCGTGTTGGTTGCATTTCAAAACCCGTTGGCTGTTGTAGTTATCAACTGGAACTATTCTTGTTTTCCGTTGTGAAATTGCAACGATGGTGGAAAGGTCTCTTGTTACATAAATTATTGACAAAGTCTGCCATTATTATTCAGTCTCGTGCTCGTGGGTGGATAGCCAGGCGAAAGGCCACTGTTCATAGACATCATATTATTGTCATCCAATCCCACTGGAAAGGTTACCTTGCACGTAAAGAGTCAAAAGAACAGCTACTGGATTTGTGCTTGAGGGTGCAAAAGTCTGCCAGAAATGTGGATGACAGCAAGCGTCTCATAAACAGACTATTGGCAGCGCTTTCAGAGCTACTTAATACGAAGAGTCTTAGTAACATGCTTCATACTTGTTCAACATTGGATATGGCTACAAGACATTCTCAGAGATGTTGTGAAGAACTTGTGGCTGCTGGGGCTATTGACACCTTGTTGTGGCTTATTAGATCAGTCAGCAGGAGTATACCTGATCAGGAGGTTCTAAAGCATGCTTTGTCAACTCTCAGAAACCTTGCTTGCTATCCTCATCTACTAGAAGTGCTGATCCAGAGTCATGGTTCTATACAGACAATCGTCTTGGAGTTACTCAGGAATAAGCAGGAGGGCTACTTCATTGCTTCTGAGCTTTTGAAGAAGATATGTTCAACTCATAAAGGCGTTGAGGCGATACTCAAATCCCCTGCTCTACTAAAAAGATTGCACAGTCTTGTTGAGGAGCTTACTAGGAAGGCGAATTATGATAAAAGAAATGTTAGGGGTCCTTCTCCAGTTGTTAGAGAAAACACGGAGAGAAGATTGAGGGAGGCTACTGAGATTCTGAAGCTGATAACAAGGGCTTGA 4428 0.4194 MDSEEPPCPSPYPRLSSSSSSLLKDISNFKTPIRPSLSLNKAQSPSTQFFTASKPTSTSHRRPIKASAAAAKKKLKAFQLEQSQSSRKAQIKKEQSLKSLAKSLTVWLNFLLESPASCGCEFPIAAAATPATNGKRDSAPANSVGVDSTWRTPKRQRKTWSRVGVENAVVELPHSSFSQLRESLKDVCSFDDLKQRMRVYLSLGTCEDIFQVITRVTKTIDGGRLNMKAHCPIVTDVGLKDKATRILMSYNPIWLRTGLYIIFGGDSLVLNGDVDPDQDVIFLKMVIDKLFFSHEGLAKAYAYNKIVEGVYRSGYYENLGNVILKRILLLVLILDKVKCQSCLPLEYGIDGLDGGSPLLFKAESWIKSSSQLIQEFLSSDVMHGEGNLLAHLVILGYKVSHQQGPLVEYDFRVRDLFVDLQDGVKLCRAIQLLQHNSSILMKIVVPSDTTKKKLANCGLALQYLRQAGISLLDEDDTMIVTDDIVSGDKELTLSLLWNMFVHLQLPLLVDKASLVEEVSKIRGLSTDLINSANSNSLELLLNWIQAVCDNYDCPIDNFHSLVDGKAIWCLLDYYFQKELHYSCSLKEVNNKIGKASIMSVNEYSDALYNFILSQKLTTLLGNFPEVLQISELLQYNGACNDRSVVILLVFLASQLFVKKNVDHLNFHKLLGYDSLSPNHRNLRMIQCLSSSESVQKSDASDMHSNEDHTRKFKAIQAWWQGMAERNHIMKPAVSNLQISRTTACIANDTRENAARTIQSHIRGLVVRRKFLKMVNVVTLLETVFRAWLKVRQQSVCMIFTSVQVYDFSCETLKRSDTYRRYTMFFVHRHSFLRLKRSAQLIQQAVRSWLHWRHEQGCSISPDLMISDTDTVATTVQTFVHGWIARSRYIRQLDQKEKALNLAPQKVIFDLQTNAAVSIQLAWKKFICCKSTQKPHFAASKIQCNIRRWSLRKTFLNQIQAAIKIQSYFRMWRCVNAFQHLKFAYKAAIVIQSFFRGWIARKDACALRNHIVEIQRHCRGWLVKRDFLFRKDAVVKIQSVIRSLKCQKALFCQKDAAMEIQRFIRGHLTRNRLLGRSSQLRAIIPVSCISRPLGFCSFQLELFMLSVVKLQRWWKGLMLLKLMNKSAIIIQSCTRGWIARRKANVHKQDIVAIQELAALEIQRYIRGHLTRNRILGGASKLRAVVRVGCISKPVGCCSYQLELFLFSVVKLQRWWKGLLLHKLLTKSAIIIQSRARGWIARRKATVHRHHIIVIQSHWKGYLARKESKEQLLDLCLRVQKSARNVDDSKRLINRLLAALSELLNTKSLSNMLHTCSTLDMATRHSQRCCEELVAAGAIDTLLWLIRSVSRSIPDQEVLKHALSTLRNLACYPHLLEVLIQSHGSIQTIVLELLRNKQEGYFIASELLKKICSTHKGVEAILKSPALLKRLHSLVEELTRKANYDKRNVRGPSPVVRENTERRLREATEILKLITRA* 1476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04738 1475 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1335 1382 IPR000225 GO:0005515
Rops2g04738 1475 Gene3D - 399 504 IPR036872 -
Rops2g04738 1475 MobiDBLite consensus disorder prediction 1 20 - -
Rops2g04738 1475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 985 1072 IPR027417 -
Rops2g04738 1475 SMART arm_5 1324 1369 IPR000225 GO:0005515
Rops2g04738 1475 Gene3D - 748 797 - -
Rops2g04738 1475 Gene3D - 1030 1081 - -
Rops2g04738 1475 Gene3D - 984 1029 - -
Rops2g04738 1475 Gene3D - 1120 1182 - -
Rops2g04738 1475 Gene3D - 932 983 - -
Rops2g04738 1475 Gene3D - 1220 1266 - -
Rops2g04738 1475 ProSiteProfiles IQ motif profile. 1153 1182 IPR000048 GO:0005515
Rops2g04738 1475 Pfam Armadillo/beta-catenin-like repeat 1325 1368 IPR000225 GO:0005515
Rops2g04738 1475 ProSiteProfiles IQ motif profile. 868 897 IPR000048 GO:0005515
Rops2g04738 1475 Pfam Calponin homology (CH) domain 412 502 IPR001715 GO:0005515
Rops2g04738 1475 ProSiteProfiles IQ motif profile. 1052 1081 IPR000048 GO:0005515
Rops2g04738 1475 Gene3D - 1267 1469 IPR011989 -
Rops2g04738 1475 Coils Coil 1455 1475 - -
Rops2g04738 1475 SMART iq_5 1005 1027 IPR000048 GO:0005515
Rops2g04738 1475 SMART iq_5 1152 1174 IPR000048 GO:0005515
Rops2g04738 1475 SMART iq_5 985 1004 IPR000048 GO:0005515
Rops2g04738 1475 SMART iq_5 1051 1073 IPR000048 GO:0005515
Rops2g04738 1475 SMART iq_5 933 955 IPR000048 GO:0005515
Rops2g04738 1475 SMART iq_5 1121 1143 IPR000048 GO:0005515
Rops2g04738 1475 SMART iq_5 956 978 IPR000048 GO:0005515
Rops2g04738 1475 SMART iq_5 749 771 IPR000048 GO:0005515
Rops2g04738 1475 SMART iq_5 1245 1267 IPR000048 GO:0005515
Rops2g04738 1475 SMART iq_5 867 889 IPR000048 GO:0005515
Rops2g04738 1475 SMART iq_5 1222 1244 IPR000048 GO:0005515
Rops2g04738 1475 Gene3D - 532 656 IPR036872 -
Rops2g04738 1475 ProSiteProfiles IQ motif profile. 957 986 IPR000048 GO:0005515
Rops2g04738 1475 ProSiteProfiles IQ motif profile. 983 1012 IPR000048 GO:0005515
Rops2g04738 1475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1205 1268 IPR027417 -
Rops2g04738 1475 ProSiteProfiles Calponin homology (CH) domain profile. 382 504 IPR001715 GO:0005515
Rops2g04738 1475 SUPERFAMILY ARM repeat 1292 1436 IPR016024 -
Rops2g04738 1475 ProSiteProfiles IQ motif profile. 750 778 IPR000048 GO:0005515
Rops2g04738 1475 ProSiteProfiles IQ motif profile. 1223 1250 IPR000048 GO:0005515
Rops2g04738 1475 Pfam IQ calmodulin-binding motif 1124 1141 IPR000048 GO:0005515
Rops2g04738 1475 Pfam IQ calmodulin-binding motif 985 1002 IPR000048 GO:0005515
Rops2g04738 1475 Pfam IQ calmodulin-binding motif 1249 1265 IPR000048 GO:0005515
Rops2g04738 1475 Pfam IQ calmodulin-binding motif 959 977 IPR000048 GO:0005515
Rops2g04738 1475 Pfam IQ calmodulin-binding motif 1156 1172 IPR000048 GO:0005515
Rops2g04738 1475 Pfam IQ calmodulin-binding motif 752 770 IPR000048 GO:0005515
Rops2g04738 1475 Pfam IQ calmodulin-binding motif 1224 1242 IPR000048 GO:0005515
Rops2g04738 1475 Pfam IQ calmodulin-binding motif 1054 1072 IPR000048 GO:0005515
Rops2g04738 1475 Pfam IQ calmodulin-binding motif 1010 1026 IPR000048 GO:0005515
Rops2g04738 1475 ProSiteProfiles IQ motif profile. 1006 1035 IPR000048 GO:0005515
Rops2g04738 1475 SUPERFAMILY Calponin-homology domain, CH-domain 329 586 IPR036872 -
Rops2g04738 1475 CDD CH_ASPM_rpt1 388 499 - -
Rops2g04738 1475 PANTHER UNCHARACTERIZED 978 1155 - -
Rops2g04738 1475 MobiDBLite consensus disorder prediction 32 63 - -
Rops2g04738 1475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 904 1002 IPR027417 -
Rops2g04738 1475 ProSiteProfiles IQ motif profile. 1122 1151 IPR000048 GO:0005515
Rops2g04738 1475 ProSiteProfiles IQ motif profile. 1246 1273 IPR000048 GO:0005515
Rops2g04738 1475 MobiDBLite consensus disorder prediction 32 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04738 Rops-Chr2 85941916 85952203 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04738 985 1153 Myosins gene family AT5G43900 27.119 2.77e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04738 K16743 - gmx:100817636 1717.59