Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04732 ATGGGGTGTCATGGTAGCAAGGAGAAAAAATCAAGGGCAGAGTTTAGTGGGTATGGATCAGGCACAGGTGGTGGTGGTAGTTACAATACTGTTCAACAACCTAGTACACAGTTTCAGACACCAGCACCCAAGGTAGAGTCACAGTCACAGTCACAGACACAACACTCACAGTCACAGGCTTCAATGGTCACCCCACAAAACCCAAAACCCCAGAATGTGAGAGTTGTGCAGAAGACAGAAGCAACCATTTTGGGGAAACCCTTTGAAGATATCAAAAAGTACTACACTTTGGGGAAAGAGTTAGGTAGAGGGCAATTTGGGATCACTTATTTGTGCACTGAGAATGCCACTGGCAACACTTATGCCTGCAAGTCCATATTGAAGAGGAAGCTTGTTTCCAAAGCTGACAAAGAAGACATGAAGAGAGAGATTCAGATTTTGCAGCATTTGTCTGGGCAACCCAACATTGTGGAATTCAAGGGTGCTTATGAGGATAGGTATTCAGTGCACCTTGTGATGGAACTATGTGCTGGTGGGGAGTTATTTGATAGAATCATTGCTCAGGGTCACTATTCAGAGAGAGCTGCTGCATCAATTTGCAGAGCCATTGTCAATGTTGTCCACATTTGTCATTTCATGGGTGTTATGCATCGTGATCTAAAGCCGGAGAATTTCTTGCTTTCTAGCAAGGATGAGAATGCAACGCTCAAGGCAACTGATTTTGGACTCTCTGTCTTCATTGAAGAAGGGAAGGTTTACCGTGATATGGTAGGAAGTGCTTACTATGTTGCTCCTGAGGTTCTGCGTCGTAGTTATGGAAAGGAAATAGATATTTGGAGTGCAGGCATCATACTGTATATTCTCCTGAGTGGTGTACCACCTTTTTGGGCCGAAACTGAAAAGGGAATATTTAATGCCATATTGGAAGGTGAGATTGACTTTGTAAGTGAACCATGGCCATCAATATCAGACAGTGCTAAAGATCTAGTCAGGAAGATGCTGACACAGGATCCAAAGAAGCGGCTTACTTCTGCTCAAGTCCTTGAACACCCATGGCTCAGAGAAGGTGGAGAGGCATCTGATAAACCAATTGATAGTGCAGTTCTATCTAGAATGAAACAATTCAGGGCAATGAATAAGCTCAAGAAACTTGCATTGAAGGTCATTGCTGAAAATCTATCAGAAGAGGAGATTAAAGGCCTCAAAGCAATGTTTGCAAATATGGACACTGACAATAGTGGCACCATCACCTATGAAGAACTGAAGACAGGCATGGCTCGAATTGGATCTTCACTGTCTGAGGCTGAAGTAAAGCAACTCATGGAAGCTGCCGATGTTGATGGCAATGGGTCAATTGACTATATTGAATTCATCTCAGCTACAATGCATAGGCACAGACTTGAACGAGATGAACATCTTTACAAAGCATTCCAGTATTTTGATAAGGACAACAGTGGGTACATTACTAGAGATGAATTGGAGACTGCTATGACACAGCATGGAATGGGTGATGAAGCAACAATAAAGGAAATAATTTCTGAGGTGGATACAGATAATGATGGGAGAATAAATTATGAGGAATTCTGTGCAATGATGAGAAGTGGAATGCCACACCAGGGACATCTACTTTAA 1632 0.4265 MGCHGSKEKKSRAEFSGYGSGTGGGGSYNTVQQPSTQFQTPAPKVESQSQSQTQHSQSQASMVTPQNPKPQNVRVVQKTEATILGKPFEDIKKYYTLGKELGRGQFGITYLCTENATGNTYACKSILKRKLVSKADKEDMKREIQILQHLSGQPNIVEFKGAYEDRYSVHLVMELCAGGELFDRIIAQGHYSERAAASICRAIVNVVHICHFMGVMHRDLKPENFLLSSKDENATLKATDFGLSVFIEEGKVYRDMVGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFNAILEGEIDFVSEPWPSISDSAKDLVRKMLTQDPKKRLTSAQVLEHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFANMDTDNSGTITYEELKTGMARIGSSLSEAEVKQLMEAADVDGNGSIDYIEFISATMHRHRLERDEHLYKAFQYFDKDNSGYITRDELETAMTQHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGMPHQGHLL* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04732 543 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Rops2g04732 543 CDD STKc_CAMK 95 352 - -
Rops2g04732 543 ProSiteProfiles EF-hand calcium-binding domain profile. 396 431 IPR002048 GO:0005509
Rops2g04732 543 ProSiteProfiles EF-hand calcium-binding domain profile. 504 538 IPR002048 GO:0005509
Rops2g04732 543 MobiDBLite consensus disorder prediction 1 73 - -
Rops2g04732 543 PANTHER SERINE/THREONINE-PROTEIN KINASE 88 528 - -
Rops2g04732 543 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
Rops2g04732 543 ProSiteProfiles EF-hand calcium-binding domain profile. 468 503 IPR002048 GO:0005509
Rops2g04732 543 Gene3D - 361 536 - -
Rops2g04732 543 FunFam calcium-dependent protein kinase 1 181 360 - -
Rops2g04732 543 FunFam Calcium-dependent protein kinase 1 97 180 - -
Rops2g04732 543 CDD EFh 475 533 IPR002048 GO:0005509
Rops2g04732 543 MobiDBLite consensus disorder prediction 22 73 - -
Rops2g04732 543 SUPERFAMILY EF-hand 392 532 IPR011992 -
Rops2g04732 543 ProSitePatterns EF-hand calcium-binding domain. 445 457 IPR018247 -
Rops2g04732 543 Gene3D Transferase(Phosphotransferase) domain 1 181 360 - -
Rops2g04732 543 ProSitePatterns EF-hand calcium-binding domain. 481 493 IPR018247 -
Rops2g04732 543 ProSiteProfiles Protein kinase domain profile. 95 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04732 543 Pfam Protein kinase domain 95 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04732 543 FunFam Calcium-dependent protein kinase 1 361 536 - -
Rops2g04732 543 ProSitePatterns Protein kinases ATP-binding region signature. 101 128 IPR017441 GO:0005524
Rops2g04732 543 Pfam EF-hand domain pair 471 533 IPR002048 GO:0005509
Rops2g04732 543 Pfam EF-hand domain pair 401 461 IPR002048 GO:0005509
Rops2g04732 543 SMART efh_1 507 535 IPR002048 GO:0005509
Rops2g04732 543 SMART efh_1 436 464 IPR002048 GO:0005509
Rops2g04732 543 SMART efh_1 472 500 IPR002048 GO:0005509
Rops2g04732 543 SMART efh_1 400 428 IPR002048 GO:0005509
Rops2g04732 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Rops2g04732 543 SUPERFAMILY Protein kinase-like (PK-like) 93 361 IPR011009 -
Rops2g04732 543 ProSitePatterns EF-hand calcium-binding domain. 516 528 IPR018247 -
Rops2g04732 543 Gene3D Phosphorylase Kinase; domain 1 97 180 - -
Rops2g04732 543 SMART serkin_6 95 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04732 Rops-Chr2 85749598 85754086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04732 1 543 EF-hand Containing Proteins AT4G04720 76.000 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops2g04732 Pkinase 2.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04732 K13412 - gmx:100812843 926.006