Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04696 ATGGAGGTTGTGTTTCCAAGACAAGAACTGTCAAATCAACATGCTGAGGAGAAGATGGAGTTCTCAAGATGTTCCAAAACTTTTGGAACTTTGAAGAGAAAGGCTGATGAAATTCATGAGTATGGTAATAAGAAACCAAAACCAGAAGGAGAAAAAGAAACTAGCTCAACAGTTGCACAAGGAGAACAGTCAAATAAGCATACTAACAATAACCTGGACCTTGGAATTTCAAAAAAGAGAAAGGTTCAGGAAATTCATAAACATCATACCAAACCAAATTCAGAAGGGAAAGAAGACATTCAGGTATGTTCAAAGAGGAGGACCCCCAAACATCTATCTAAGAAAGGAGATGAGCCTAAGAAACTAGCTGCCTCGAACAAGACAAGGCAATCTAAGGATGATCTCTTAATTAACAATTTAGAAGAAGATGAAGAAATGTTTTTTCTTTTAAAGACAAAGACCCGGAGCCGAGCTAGTAGAAATGATAACGTGATGGATGTTCAACAAAATCCCCGGAAATGTCATCAGTGCGTCAAGGAGAGAACAGTTTTTGTGCCTTGCACTAAATGTCCAAAAATGTACTGTTTGCGATGCATCAACCAATGGTACCCTGATATGTCAGTAGAAGAAATTGCCAGAAGTTGCCCGTTTTGCAGTAAGAATTGCAATTGCAATGTTTGCTTGCGTTCAAGAGGGATAATTAAGACATCTAACGGGGACATCACCAATTATGAAAAAGCTCAATATCTGCAATATATGATTAACTTACTCCTTCCATATCTGAAACAAATTTGTCACGAACAAAGTCAAGAGGAAGAGATTGAAGCTAAAATACAAGGAAAATCTTCTGGTGAGATTGAGATACAGCAAAGTCTTTGTTTTGACAATGAACGTGTGTATTGTGACCATTGTGCTACTTCAATTGTTGACCTTCATCGAAGCTGCCCCAAGTGTTCCTATGAACTCTGCCTTAGTTGTTGCCAAGAAATACGTGATGGAAGCATTACACCTCGAGCTGAGCTGAAGTTCCAATATGTAAATAGGGGTTATGATTATATGCATGGTGGTGACCCTCTACCAGTGTTTTGTGATTTAGAGACTTCAGATGGTCATATTAAGCTATCTGCTGAGTGGAAAGCCAGGATTGATGGAATTGTTAGTTGTGCACCCAAGGAGATGGGGGGTTGTGGTAGTTCTGTATTGGAGCTGAGGCGCATTCTCCCTCATGGGTGGATATCTGATTTGGAAGCCAAAGCTCGCAAGATGCTGAAAATTTGGGAAATTAAACGGACGACTTTTCAGCAGAAAGAAGCGGTATCAAGCTACAACTCTATGAGAAAGGCAGCCTTTAGAGAAGGCACAAATGACAATAACATACACTGTCCAGAGTCAAGAGACATTTTAAAAGAAGGGGTGCTGCTTTTCCAAAAGCATTGGACTAATGGTGAACCGATTATAGTTCGTGATGTTCTTAAACAAGGGACAGGTTTGAGCTGGGAGCCAACGGTCATGTGGCGAGTATTATGTGAAAATACAGGTTCAGAAATCAGTTCAAAAATGTCAGAAGTGAAGGCCATTGATTGCCTGGCTAATTGTGAGGTAGAAATTAATACTAATATGTTCTTCAAAGGTTATATAGAGGGAAGGACTTACAAAAATCTCTGGCCAGAGATGCTCAAGCTAAAAGACTGGCCCCCCTCTGATAAATTTGAAGATCTCTTGCCCCGCCATTGTGATGAGTTTATTTGTACCTTGCCATTTCAAGAGTATACTGACCCTCGGGCTGGAATTCTTAATCTAGCTGTGAAGTTGCCAGCCCATGTCCTGAAACCTGACATGGGTCCAAAAACATACATTGCTTATGGGATTAAAGAAGAACTTGGTAGAGGAGACTCTGTAACAAAGCTACACTGTGATATGTCAGATGCGGTGAATATTTTGACCCATACAGCTGAGGTGATATTAACTGACGAGCAGCACTCCGTTATTTCAAAGTTGAAAGAAGCACACAAGGCTCAAGATGATGGAGAACACTCTGCTCATGAGAGGGTTGCTAAATGCCTGAATGGTCGACCTTGCAAAGACAACAGAGGACATATAGAAAATAAGGAAGTCTTAGAACCCAAATATATGGAGAAGCGCCCTATTGAAATTAATGGAAACATCTTTCCAAATGATGTGTCTAAGGGGGAAACAGGTTGTGCCCTATGGGATATATTTAGGCGAGAGGATACTGAAAAGTTAGAAACATATCTAAGAAAACACTCAAAAGAATTTAGACATACTTATTGTTCTCCAGTTGAACAGGTTGTACATCCAATTCATGACCAATGTTTTTATTTGACTTCGGAGCACAAGAAGAAGCTGAAGGAGGAGTTTGGTGTAGAACCCTGGACTTTTGAGCAGAATCTTGGTGAGGCAGTATTTATTCCTGCAGGATGCCCACATCAAGTTAGGAATCTCAAGTCATGCACAAAAGTTGCTGTAGACTTCGTGTCCCCAGAAAATGTCTATGAGTGTCTGCGTTTGACTAATGAGTTTCGACAGCTTCCCAGGAACCACAAGGCTAGAGAAGATAAACTTGAGATAAAGAAGATGATAGTTTATGCCGTTGATCAAGCTGTCAAAGACTTAAAAGCTTTAATTAAGTGTTCTTGA 2658 0.4018 MEVVFPRQELSNQHAEEKMEFSRCSKTFGTLKRKADEIHEYGNKKPKPEGEKETSSTVAQGEQSNKHTNNNLDLGISKKRKVQEIHKHHTKPNSEGKEDIQVCSKRRTPKHLSKKGDEPKKLAASNKTRQSKDDLLINNLEEDEEMFFLLKTKTRSRASRNDNVMDVQQNPRKCHQCVKERTVFVPCTKCPKMYCLRCINQWYPDMSVEEIARSCPFCSKNCNCNVCLRSRGIIKTSNGDITNYEKAQYLQYMINLLLPYLKQICHEQSQEEEIEAKIQGKSSGEIEIQQSLCFDNERVYCDHCATSIVDLHRSCPKCSYELCLSCCQEIRDGSITPRAELKFQYVNRGYDYMHGGDPLPVFCDLETSDGHIKLSAEWKARIDGIVSCAPKEMGGCGSSVLELRRILPHGWISDLEAKARKMLKIWEIKRTTFQQKEAVSSYNSMRKAAFREGTNDNNIHCPESRDILKEGVLLFQKHWTNGEPIIVRDVLKQGTGLSWEPTVMWRVLCENTGSEISSKMSEVKAIDCLANCEVEINTNMFFKGYIEGRTYKNLWPEMLKLKDWPPSDKFEDLLPRHCDEFICTLPFQEYTDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVILTDEQHSVISKLKEAHKAQDDGEHSAHERVAKCLNGRPCKDNRGHIENKEVLEPKYMEKRPIEINGNIFPNDVSKGETGCALWDIFRREDTEKLETYLRKHSKEFRHTYCSPVEQVVHPIHDQCFYLTSEHKKKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVYECLRLTNEFRQLPRNHKAREDKLEIKKMIVYAVDQAVKDLKALIKCS* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04696 885 SUPERFAMILY Clavaminate synthase-like 474 880 - -
Rops2g04696 885 CDD cupin_RmlC-like 772 832 - -
Rops2g04696 885 ProSiteProfiles Zinc finger RING-type profile. 174 219 IPR001841 -
Rops2g04696 885 MobiDBLite consensus disorder prediction 88 128 - -
Rops2g04696 885 MobiDBLite consensus disorder prediction 11 52 - -
Rops2g04696 885 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 49 881 IPR045109 GO:0032454|GO:0033169
Rops2g04696 885 Gene3D Cupin 461 857 - -
Rops2g04696 885 MobiDBLite consensus disorder prediction 53 72 - -
Rops2g04696 885 MobiDBLite consensus disorder prediction 1 130 - -
Rops2g04696 885 SMART cupin_9 574 848 IPR003347 -
Rops2g04696 885 Pfam JmjC domain, hydroxylase 735 831 IPR003347 -
Rops2g04696 885 ProSiteProfiles JmjC domain profile. 593 848 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04696 Rops-Chr2 85283772 85289397 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Rops2g04696 JmjC 3e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04696 K15601 K21989 gmx:100797860 1357.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04696 2 85283772 85289397 Rops2g04696 2 85283772 85289397 ECH
Rops2g04696 2 85283772 85289397 Rops11g01095 11 15988692 16014640 PCT