LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops2g04692	ATGGAACCTACAATAAACTCCACGGTTTCAAACACGTCATTAATGGTTTTGCTGTCCACACAACCCCTTCCCAGTGACCAAAAACTTCAGGCTACCAGACTGAGAGGTATTCCTGGAGTGAAGTTGGTAGAGAAAGATAGAGGAGTGAAAGTGATGACAACTTACACTCCCGACTTTCTAAATTTACCAAATGGAATATGGGCACAAGAAGGAGGAGATAGAAACGCAGGTGATGGAGTTGTCATTGGTTTTGTTGATAGTGGCATCAATCCATGTCATCCTAGCTTTGCTTATGATCCCATGCACCCTTTCACATCAAATCTCTCTCATTTTTTCGGTGCCTGTGAGACCGGTCCATTTTTCCCTGATAGTTCTTGCAATGGAAAGATAGTGTCAGCGAGGTACTTCTCTGCTGGGGCTGAAGCTGTTGCTACCCTTAATGCTTCAGTGGATTTTCTTTCACCGTTTGATGCAGATGGACATGGCAGTCATGTGGCATCTATTGCTGCTGGAAATGCTGGTGTTCCTGTTGTTGTGAATGGCTTTTTCTATGGACGAGCAAGTGGAATGGCACCACGTGCAAGGATTGCTGTTTATAAGGCTATCTATCCATCTGCGGGAACTCTAGCTGATGTTATTGCAGCTATCGATCATGCTGTCTTTGATGGGGTGGATATCTTATCGCTTTCTATTGGACCAAATGAACCAGCAGAAGACACATTGACCTTCTTGAGCATCTTTGATATTACCTTGTTATTTGCACGAAAAGCAGGAGTTTTTGTGGTGCAAGCTGCAGGGAATAAAGGTCCAGCATCTTCAACTGTAGTGTCATTCAGTCCCTGGAGTGTAGGTGCTGCTGCTTGCAGCACAGACAGAAAGTACGCTGCTTCACTTCTTCTTGGAAATGGCCAATTCCTAGATGGCATAGGACTATCAGGACCAAGTTTTGGAAATGGGACAGTTTACCATAAGCTTGTATTAGCCAAGGATGCATTAAAAATAAATGGAACATTTCCAAGGACTCCGGAGTACATAGAAGAGTGCCAACATCCAGAAGCCTTGGACCCTAATCTAGTATTAGGAAGTATCATTATCTGCAACTTCTCAACGGGCTTCTACAATGGAACCTCAACTCTTGCTGCCATTATTAACACCGCAAAGGCTCTAAAATTCGAGGGTTTTATTCTAGCTGCGAACCCAAGCTATGGTGATTATATAGCTGAGCCAATTCCTTTTGCTATTTCTGGTATTTTGATCCCTCATGTAACTGATGCTAAGGTTTTATCACAGTATTACGAAGAACGTACCAAGAAGGATGAGAGAGGAACTGTCACAGAATTTGGTGCTGGTGCAGCTATGGGGGAAGGAAGAGTTGCCTCTTTCACAGGAAGATCACCCATTGTTAGTAGATTTTCTTCAAGGGGTCCAGATATTATTGACAGGAAGAAAAATCCTGCTGATGTACTTAAACCTGATATTCTTGCTCCAGGGCACCAAATATGGGCAGCATGGAGCCCTATTAGTGCCAGAGAACCTATGCTGAAAGGGTACAATTTTGCATTATTATCTGGTACCAGCATGGCCACACCTCATGTGGCTGGAATAGCAGCACTTATCAAGCAACATAATCCATCATGGACTCCATCTATGATAGCATCTGCAATCTCCACAACCAGCACAAAGTATGATAATCTTGGAGAGCATATCATGGCTGAGGGCTTAGAGATCAACAGCTTGCATCCCTCCACTCCTTTTGAATATGGTGCTGGCATTGTGAACCCCAACTGTGCAAATGATCCAGGCTTGGTACTACCATCAGGATATGAAGACTTCATCAGCTTCTTGTGCTCTTTGCCAAACATCGACTCGGATACAGTGATTGCAGCCACTGGAGAAAATTGCAATAACCCATTTGACTATCCTTCCAATCTAAACCTTCCTTCGGTAACAATATCTGAACTGAGAGGATCAGTTTCTGTGATGAGAACTGTCATGAATGTAGGGAACAACACGGAAACATACTCAGGTTCTGTTCTACCTCCAAATGGAACAACAGTCAACCTTTATCCAACTTGGTTTACCATAAGTCCACAACAAACACAAAATCTGGAAATACAACTCAGTGTCATTCAATCAATGGAAGAGTTTAGCTTTGGTGAAATTGTTTTGACAGGAAGTTTGGGCCACATTATAAGAATCACATTGTCAGTTGTACCAATTTCAGTATAG	2229	0.4293	MEPTINSTVSNTSLMVLLSTQPLPSDQKLQATRLRGIPGVKLVEKDRGVKVMTTYTPDFLNLPNGIWAQEGGDRNAGDGVVIGFVDSGINPCHPSFAYDPMHPFTSNLSHFFGACETGPFFPDSSCNGKIVSARYFSAGAEAVATLNASVDFLSPFDADGHGSHVASIAAGNAGVPVVVNGFFYGRASGMAPRARIAVYKAIYPSAGTLADVIAAIDHAVFDGVDILSLSIGPNEPAEDTLTFLSIFDITLLFARKAGVFVVQAAGNKGPASSTVVSFSPWSVGAAACSTDRKYAASLLLGNGQFLDGIGLSGPSFGNGTVYHKLVLAKDALKINGTFPRTPEYIEECQHPEALDPNLVLGSIIICNFSTGFYNGTSTLAAIINTAKALKFEGFILAANPSYGDYIAEPIPFAISGILIPHVTDAKVLSQYYEERTKKDERGTVTEFGAGAAMGEGRVASFTGRSPIVSRFSSRGPDIIDRKKNPADVLKPDILAPGHQIWAAWSPISAREPMLKGYNFALLSGTSMATPHVAGIAALIKQHNPSWTPSMIASAISTTSTKYDNLGEHIMAEGLEINSLHPSTPFEYGAGIVNPNCANDPGLVLPSGYEDFISFLCSLPNIDSDTVIAATGENCNNPFDYPSNLNLPSVTISELRGSVSVMRTVMNVGNNTETYSGSVLPPNGTTVNLYPTWFTISPQQTQNLEIQLSVIQSMEEFSFGEIVLTGSLGHIIRITLSVVPISV*	743

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops2g04692	742	CDD	Peptidases_S8_3	49	560	IPR034197	-
	Rops2g04692	742	Gene3D	-	615	739	-	-
	Rops2g04692	742	Pfam	Fibronectin type-III domain	643	737	IPR041469	-
	Rops2g04692	742	PRINTS	Subtilisin serine protease family (S8) signature	157	170	IPR015500	-
	Rops2g04692	742	PRINTS	Subtilisin serine protease family (S8) signature	77	96	IPR015500	-
	Rops2g04692	742	PRINTS	Subtilisin serine protease family (S8) signature	523	539	IPR015500	-
	Rops2g04692	742	CDD	PA_subtilisin_like	297	432	-	-
	Rops2g04692	742	Gene3D	-	291	459	-	-
	Rops2g04692	742	SUPERFAMILY	Subtilisin-like	51	602	IPR036852	GO:0004252\|GO:0006508
	Rops2g04692	742	Pfam	Subtilase family	77	563	IPR000209	GO:0006508\|GO:0008236
	Rops2g04692	742	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	82	93	IPR023827	-
	Rops2g04692	742	Gene3D	Peptidase S8/S53 domain	79	611	IPR036852	GO:0004252\|GO:0006508
	Rops2g04692	742	ProSitePatterns	Serine proteases, subtilase family, serine active site.	524	534	IPR023828	-
	Rops2g04692	742	ProSiteProfiles	Serine proteases, subtilase domain profile.	54	598	-	-
	Rops2g04692	742	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	161	171	IPR022398	-
	Rops2g04692	742	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	28	735	IPR045051	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops2g04692	Rops-Chr2	85249097	85251710	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops2g04692	30	740	Subtilisin-like Serine Gene Family	AT1G62340	63.928	0.0	920

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops2g04692	-		-	gmx:100798915	1152.12