Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04684 ATGAAAGCCTCAAAGCAACAGAAGCAGCACCAACTTCAACAAAGAGGATGCAGGGCCTTATGTTGCAGTTGCAGATTTAGTGTTTCTTCATCAGAGGAAGCAGAGAGTTCTGCCTCTAATAGGTTCCCTTCTGTTTCTAGCCTAGCACATGCCATGGTGCAAGAGAGACTTGACCAAATGATTAGAGAAAAAATGGAAGCTAGACATGTAGAGAGAAGAAGGCATCAGAGCAGAGAAGGAACCAAGTTTGTTGTAATGGTAGCAATGGAGAAGTGCTCTTATGATCCGAGAGAGGATTTTCGAGAGTCCATGATGGAGATGATAACTGCGAACCGTCTTCAAGATGCAAAAGATCTTCGTAGTCTATTGAACTATTATATCTCCATGAACTCTGAAGAGTACCATAGTGTTATACTTGAGGTATTTCATGAGGTTTGTACTAATTTGTTCTTGTCATGTAAATGCCATTGGTAA 474 0.4093 MKASKQQKQHQLQQRGCRALCCSCRFSVSSSEEAESSASNRFPSVSSLAHAMVQERLDQMIREKMEARHVERRRHQSREGTKFVVMVAMEKCSYDPREDFRESMMEMITANRLQDAKDLRSLLNYYISMNSEEYHSVILEVFHEVCTNLFLSCKCHW* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04684 157 NCBIfam uncharacterized plant-specific domain TIGR01568 87 150 IPR006458 -
Rops2g04684 157 ProSiteProfiles OVATE domain profile. 89 148 IPR006458 -
Rops2g04684 157 Pfam Transcriptional repressor, ovate 93 150 IPR006458 -
Rops2g04684 157 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 150 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04684 Rops-Chr2 85135879 85136352 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops2g04684 Ovate 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04684 - - var:108330150 267.314