Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops2g04682 | ATGAGTCAACTCGGTGTGATATTGCGGGAATCGTTGTCAACTGAAAGAGAAGCAAGAACCATTCTTGGTTTGTTAACGGAGCAAATGGACGGTGTGGATAGAGGGCAACGTAGGAGGCGTAGTCTCAAAGAACGGCTCAGATTCACTGGAATGGGATGTTGTGGGGCCACCTGGGTTTTCCGTCCAGTTAGACACGAACAGCATGAGGAGGAGCAACAACAAGTCCCGGGTCAAGATCCGGACCCGGTAGGACCCGAATGTGTGGGTCCGGGTCCGTCGGGTTCAGGGATGAATCTTGCGGCGGCGTTGGCGGCGGAGCGTCAATTACGGGGATCGCAGGAGGCGGAGGCGGGAGGAGAAACGGAGGCGGAGGCGGGAGGAGAAACGGAGACGCCGTCGAGGGTTTCGTTGATGAGGCTGTTGGAGGAAACGGAGGTGGAAACGGAGAAAGGTGGAGAGACGATGGGGAATGATTCGGTGTGCTGCGTGTGCATGGGGAGGAAGAAAGGCGCGGCTTTCATCCCATGTGGTCACACTTTTTGTAGGGCGTGTTCGAGGGAGCTGTGGTTGAATCGAGGGAGTTGTCCACTTTGCAATCGTTCAATTCTCGAGATTCTCGATATCTTCTGA | 630 | 0.5524 | MSQLGVILRESLSTEREARTILGLLTEQMDGVDRGQRRRRSLKERLRFTGMGCCGATWVFRPVRHEQHEEEQQQVPGQDPDPVGPECVGPGPSGSGMNLAAALAAERQLRGSQEAEAGGETEAEAGGETETPSRVSLMRLLEETEVETEKGGETMGNDSVCCVCMGRKKGAAFIPCGHTFCRACSRELWLNRGSCPLCNRSILEILDIF* | 210 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops2g04682 | 209 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 139 | 209 | IPR013083 | - | |
Rops2g04682 | 209 | Pfam | Zinc finger, C3HC4 type (RING finger) | 158 | 203 | - | - | |
Rops2g04682 | 209 | ProSiteProfiles | Zinc finger RING-type profile. | 161 | 199 | IPR001841 | - | |
Rops2g04682 | 209 | SUPERFAMILY | RING/U-box | 154 | 206 | - | - | |
Rops2g04682 | 209 | CDD | RING-HC | 161 | 198 | - | - | |
Rops2g04682 | 209 | PANTHER | OS01G0917900 PROTEIN | 5 | 209 | - | - | |
Rops2g04682 | 209 | SMART | ring_2 | 161 | 198 | IPR001841 | - | |
Rops2g04682 | 209 | MobiDBLite | consensus disorder prediction | 66 | 133 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops2g04682 | Rops-Chr2 | 85080893 | 85082072 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops2g04682 | 21 | 209 | C3H Transcription Factor Family | AT4G22250 | 54.762 | 1.32e-60 | 187 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops2g04682 | - | - | gmx:106799504 | 237.269 |