Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04678 ATGTGGAATGAGGACGAGAGTGGACAACTTCGTACCCAGAAATCAGAGTACATGACCAATAAAATAAATCGATGTCACAATAGCTCCAAAATCCAAAGTAAAGAAAAAATAGCGAAAGTGAGAAGAAAAAAAAGAAAAGATTTTGGCGCCAAAACCATGAAGCTCGACACCTCCAACGGCCAGATTTCCTTCTCCTCCGTTGACGTTTCTCCGCCGCAGAACGATGACGCCGACGCCGAGGAGATATTCGTGCCGCCGTTGAACTTCGCGATGGTTGACAATGGCATTTTCAGGTCTGGCTTTCCTGATTCTGCCAACTTCGGATTCTTGAAATCCCTACGTCTCCGTTCCGTAATATGTTTGTGCCCTGAACCGTATCCAGAAACTACTGCGGAGTTTTTGAAGGCCAATGGAATAAAGCTTTATCAATTAGGGATCGATGGCTGTAAGGAACCCTTTGTCAACATCCCAGACGATACAATTCGTGAAGCTTTGAAAGTAGTCCTCGATGTTAGGAACCACCCCCTGCTGATTCATTGTAAACGAGGGAAGCATCGCACTGGTTGTCTTGCGGGATGCATAAGAAGATTGCAGAGATGGTGTCTATCATCGGTTTTTGATGAGTACCAAAGGTTTGCAGGTGCCAAAGCCAGAGTATCTGACCAGAGGTTCATCGAATTGTTCGATATTTCTTGTTTTAAGCACCACCCACTGTCATTTTCATGCTTAAGGAAATAG 738 0.4472 MWNEDESGQLRTQKSEYMTNKINRCHNSSKIQSKEKIAKVRRKKRKDFGAKTMKLDTSNGQISFSSVDVSPPQNDDADAEEIFVPPLNFAMVDNGIFRSGFPDSANFGFLKSLRLRSVICLCPEPYPETTAEFLKANGIKLYQLGIDGCKEPFVNIPDDTIREALKVVLDVRNHPLLIHCKRGKHRTGCLAGCIRRLQRWCLSSVFDEYQRFAGAKARVSDQRFIELFDISCFKHHPLSFSCLRK* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04678 245 PRINTS Plant and fungal dual specificity phosphatase signature 83 100 IPR020428 GO:0016791
Rops2g04678 245 PRINTS Plant and fungal dual specificity phosphatase signature 139 153 IPR020428 GO:0016791
Rops2g04678 245 PRINTS Plant and fungal dual specificity phosphatase signature 156 170 IPR020428 GO:0016791
Rops2g04678 245 PRINTS Plant and fungal dual specificity phosphatase signature 120 133 IPR020428 GO:0016791
Rops2g04678 245 Pfam Tyrosine phosphatase family 84 237 IPR004861 -
Rops2g04678 245 ProSitePatterns Tyrosine specific protein phosphatases active site. 178 188 IPR016130 GO:0016311|GO:0016791
Rops2g04678 245 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 83 230 IPR029021 -
Rops2g04678 245 Gene3D Protein tyrosine phosphatase superfamily 82 232 IPR029021 -
Rops2g04678 245 CDD PFA-DSP_Siw14 83 229 - -
Rops2g04678 245 ProSiteProfiles Dual specificity protein phosphatase domain profile. 88 240 IPR020422 GO:0006470|GO:0008138
Rops2g04678 245 MobiDBLite consensus disorder prediction 1 25 - -
Rops2g04678 245 FunFam probable tyrosine-protein phosphatase At1g05000 82 232 - -
Rops2g04678 245 PANTHER TYROSINE-PROTEIN PHOSPHATASE 76 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04678 Rops-Chr2 85041439 85046954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04678 53 245 Protein tyrosine phosphatase (PTP) family AT4G03960 65.285 1.18e-95 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04678 K18045 - gmx:100785520 354.369