Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04646 ATGCAAACATCTGAGAAACACCCAAGTTCAGCTGGTATTCATTTCTATCACCAACCCGCGCAAGGCATTTACCAAATGTTACAAAGCAATTTATACCGTGGTGTCCATGACAGCAGCAGCCAGGGAACTTCTGTTTCTTTTGAAACCTGCAAGGAGCAATACTTTACCCTGGAATCATGCCCAGCAATCACTGGTTTCATGGATTGTGATTCCCCTTCTTATGCCAGTGTCTCATCTAACAGGAGTCCATTTTCTTCACAAGATTCTCAGTCATGCTATTCAGATCACCACCAGTCATCTGACAACACCTATGGATCACCAATAAGCGGGTTGTCCAGTGTTGATGATGGGAATGAATTGAAGCACAAACTTAGAGAACTGGAGATGTCATTGCTGGGGCCTGATGAATCAGATATTGTTGACAGTTATGGCTGCTGTGTCAAGGGTGGCCTCCACGAAGCATCTCCATTAGCTAAATATAACTGGGATCTGATTGCAGAAAATATTTCAAAGCTAGACTTGAAAGAAGTCCTCATGCTATGTGCACAGGCTGTGTCTGATGATGATATTCCAACAGCAAGAGGCTGGATGGATAATGTATTGGGGAAGATGGTATCGGTTGCCGGAGATCCATTCCAAAGGTTGGGTGCTTACTTGTTGGAGGGGCTTAGAGCAAGGTTGGAATCATCAGGGAGTATGATCTACAAAACCTTGAAGTGTGAACAACCAACAAGCAAAGAACTAATGAGTTACATGCACATCTTGTATCAGATTTGTCCATATTGGAAGTTTGCATACATATCTGCAAATGCTGTCATTGCAGAAGCAATGGAAAATGAATCCAGGATTCATATAATTGATTTCCAAATAGCACAGGGCTCACAATGGTTTTTACTTATCCAGGCTCTTGCACATAGGCCTGGAAGACGACCCCCTTTCATTCGTATAACCGGTGTTGATGATTCCCAATCATTTCATGCTCGGGGTGGAGGACTTCAGATTGTAGGAGAAAGACTTTCAGAATTTGCAAGGTCTTGTGGTGTTCCATTTGAGTTCCACAGTGCTGCAATGTCTGGCTGTGAGGTTCAAAGAGAAAATCTAGGAGTTCGACCTGGGGAGGCTCTTGCTGTAAATTTTCCTTTTGTTTTGCACCACATGCCAGATGAGAGTGTGAGCACGGAGAATCATAGAGACAGACTTTTGAGATTGGTTAAGAGCTTGTCTCCAAAGGTTGTTACCCTTGTTGAGCAAGAATCCAACACCAACACTTCACCTTTCCTTCACAGGTTTGCTGAGACCCTGGATTATTATACAGCTATGTTTGAATCAATAGACGTGGCTTGCCCAAGAGATGATAAGAAGCGGATTAGTGCTGAGCAGCACTGTGTGGCACGGGACATTGTCAACATGATAGCCTGTGAGGGGGTTGAGAGGGTGGAAAGGCATGAACTTTTTGGAAAGTGGAGGTTAAGATTTTCCATGGCTGGATTTAAACAATGTCCATTGAGTTCTTCAGTGATGGCTGCTGCCCAAAATCTCTTGAAGGACTTCAATCAAAACTATAGGCTTGAACAGAGAGATGGTGCTCTATGCCTTGGTTGGATGAAGAGAGTTTTGGTCACCTCTTCTGCTTGGAGGTGA 1641 0.4381 MQTSEKHPSSAGIHFYHQPAQGIYQMLQSNLYRGVHDSSSQGTSVSFETCKEQYFTLESCPAITGFMDCDSPSYASVSSNRSPFSSQDSQSCYSDHHQSSDNTYGSPISGLSSVDDGNELKHKLRELEMSLLGPDESDIVDSYGCCVKGGLHEASPLAKYNWDLIAENISKLDLKEVLMLCAQAVSDDDIPTARGWMDNVLGKMVSVAGDPFQRLGAYLLEGLRARLESSGSMIYKTLKCEQPTSKELMSYMHILYQICPYWKFAYISANAVIAEAMENESRIHIIDFQIAQGSQWFLLIQALAHRPGRRPPFIRITGVDDSQSFHARGGGLQIVGERLSEFARSCGVPFEFHSAAMSGCEVQRENLGVRPGEALAVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFLHRFAETLDYYTAMFESIDVACPRDDKKRISAEQHCVARDIVNMIACEGVERVERHELFGKWRLRFSMAGFKQCPLSSSVMAAAQNLLKDFNQNYRLEQRDGALCLGWMKRVLVTSSAWR* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04646 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 112 540 IPR005202 -
Rops2g04646 546 Pfam GRAS domain family 174 546 IPR005202 -
Rops2g04646 546 ProSiteProfiles GRAS family profile. 165 546 IPR005202 -
Rops2g04646 546 MobiDBLite consensus disorder prediction 80 111 - -
Rops2g04646 546 Coils Coil 507 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04646 Rops-Chr2 84634785 84638334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04646 1 546 GRAS Transcription Factor Family AT4G17230 60.146 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops2g04646 GRAS 1.1e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04646 - - gmx:100776109 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04646 2 84634785 84638334 Rops11g01148 11 16828893 16832593 PCT