Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04643 ATGGAAGTCAAATCTTCATTCCTAGTCATTACCTTCTTCCTCTCACTCTTGATACTTCGGCTTGTAAAGATCTACAAGCCAAAGAGTGTGCATAAATTGCCACCAGGGCCATGGAAGCTTCCTCTCATAGGGAACCTGCATCAACTAGCAGCAGCAAGCTCACTTCCTCACCATGCTCTCCGAGAACTATCCCAAAAATATGGACCCTTGATGCACCTACGACTTGTAGACATAGCTTTTGCTCCATACGGTGATTACTGGAGACAAATGAGGAAAATATGTACATTGGAGCTTTTTAGTGCCAAGAAGGTTCAGTCTTTCTCCCATATTAGAGAAGATGAGGTGGCCAAACTTATGGAAACAATTCAATCACATGCAGGAAGCAACAGCATTGGCAGATATGGCTTTGACATTGCTGATTTGTTTCCTTCTTTGAAACCTTTCCATCTCAAAACAGGGTTGAAAGCTAAATTGGAGAGGATGCTTGACAAGATTTTAGAGAAGATTGTAAAGGAGAATCAAGTAAAGCAGATGAGAACAAACGAAAGCATGAGAGAAGAAAAGGACGAAAATCTTGTTGAGGTTCTTTTACGAGTCCTACACAGTGGCAACCTTGAGAACCCAATTACAACCAACAATATCAAAGCCGTGATTTGGGACATATTTGCAGCCGGAACAGATACTTCAGCAAAAGTAATAGAATGGGCAATGGCAGAAATGATGAGAAACCCAAGAGTAAGGAAGAAAGCACAAGCTGACATCAGAGAAACTTTGAGAGGAAAAGAAACTATCCATGAGACTGACATAGGTGGGCTTAGCTACTTAGAGGCAGTAATCAGAGAAACCTTGAGGTTACACCCACCTCTTCCTTTGTTGCTTCCAAGAGAATGCAGGGAAGCATGCAGGATCAATGGATATGAATTACCAGCTAAGACTATGGTCATAGTGAACGCATGGGTACTTGGAAGAGATCCTGAGCACTGGTATAATGGTGACAGCTTTATACCAGAAAGGTTCCATGGTACTTCTATTGATTTCAAAGGGATAAACTTTGAATACATTCCTTTTGGGGCAGGAAGGAGAATATGTCCAGGCATTTCATTCGGTTTGACCAATGTTAAGTTTGCACTAGCCAAATTACTCTACCACTTCAACTGGGAACTCCCAGAAGGAATGAAACCAGAGGAGTTGGATATGGATGAAGCATTTGGAGCAATGGTTGGAAGGAAAAACAACCTTTTCTTGATTCCCACTCCTTACAATCCTTCAATTCTTGATGATTCAATTCTACCCACCAGCGAGTAG 1305 0.4176 MEVKSSFLVITFFLSLLILRLVKIYKPKSVHKLPPGPWKLPLIGNLHQLAAASSLPHHALRELSQKYGPLMHLRLVDIAFAPYGDYWRQMRKICTLELFSAKKVQSFSHIREDEVAKLMETIQSHAGSNSIGRYGFDIADLFPSLKPFHLKTGLKAKLERMLDKILEKIVKENQVKQMRTNESMREEKDENLVEVLLRVLHSGNLENPITTNNIKAVIWDIFAAGTDTSAKVIEWAMAEMMRNPRVRKKAQADIRETLRGKETIHETDIGGLSYLEAVIRETLRLHPPLPLLLPRECREACRINGYELPAKTMVIVNAWVLGRDPEHWYNGDSFIPERFHGTSIDFKGINFEYIPFGAGRRICPGISFGLTNVKFALAKLLYHFNWELPEGMKPEELDMDEAFGAMVGRKNNLFLIPTPYNPSILDDSILPTSE* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04643 434 Gene3D Cytochrome P450 27 413 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04643 434 SUPERFAMILY Cytochrome P450 34 419 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04643 434 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04643 434 PRINTS E-class P450 group I signature 363 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04643 434 PRINTS E-class P450 group I signature 317 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04643 434 PRINTS E-class P450 group I signature 353 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04643 434 Coils Coil 155 175 - -
Rops2g04643 434 PRINTS P450 superfamily signature 277 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04643 434 PRINTS P450 superfamily signature 354 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04643 434 PRINTS P450 superfamily signature 224 241 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04643 434 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04643 434 FunFam Predicted protein 222 415 - -
Rops2g04643 434 CDD CYP71-like 66 413 - -
Rops2g04643 434 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 356 365 IPR017972 GO:0005506|GO:0016705
Rops2g04643 434 Pfam Cytochrome P450 137 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04643 434 PANTHER OS08G0105600 PROTEIN 77 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04643 Rops-Chr2 84558099 84559820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04643 14 420 Cytochrome P450 AT3G26300 37.849 7.10e-106 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04643 - K15472 gmx:100800554 610.142