Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04627 ATGCTCACTAGGTTACCTGCATGGAAATTTTGTACTTCGGAGGACTTAATGCTTAAGCTTGCATTCCAAAAAGAAGCACCTATGATACCTAATGGATTGAGTGAGAATTGCAAAGATTTCTTGCATAAGTGTTTTGTGAAGGACCCTAGAAGGAAATGGACCGGTTTTCTATATGATAGGCTGCAAAAAGAGGTCATCAATTTGAGAAAGTCTTGTGAAAGTAAAGACAGTAGTTTGCAAGCTAAAGATGAAGAAATTAAGATGCTTATGAAGAAAGTTGATGCACTGACAAAGGCAATGGAAGTAGAGTGGAAGAGAATGAAAAGAGAAGCAGCTGCTAGAGAGAAAGAGGCTTCAGCAACAAAATCAGATGATAACAGGAGAAAAACAAAAGCACAAAATCCTCTAAAAGGGCGATGA 420 0.381 MLTRLPAWKFCTSEDLMLKLAFQKEAPMIPNGLSENCKDFLHKCFVKDPRRKWTGFLYDRLQKEVINLRKSCESKDSSLQAKDEEIKMLMKKVDALTKAMEVEWKRMKREAAAREKEASATKSDDNRRKTKAQNPLKGR* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04627 139 Coils Coil 79 99 - -
Rops2g04627 139 Gene3D Transferase(Phosphotransferase) domain 1 1 134 - -
Rops2g04627 139 MobiDBLite consensus disorder prediction 108 132 - -
Rops2g04627 139 SUPERFAMILY Protein kinase-like (PK-like) 1 54 IPR011009 -
Rops2g04627 139 Pfam Microtubule-associated protein 70 52 132 IPR009768 GO:0007010|GO:0008017
Rops2g04627 139 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 48 133 IPR009768 GO:0007010|GO:0008017
Rops2g04627 139 MobiDBLite consensus disorder prediction 108 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04627 Rops-Chr2 84323800 84329176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04627 16 98 MAP Kinase Kinase Kinase AT5G67080 36.145 8.03e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04627 - - gmx:100798976 112.464