Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04613 ATGGACAACTCCCAATCCCAAATGTTCAACTATGGAAACAGCGGCAGCGGTGTGAGTGAGATAGAGGAAGAGGACTGGGAGACCCAACACCATGATGGGTCTATGGCAGCCATTAGTGAAGAAGAAGAAGACTGTGTTTATATAGCAGTTGGTAAGAGCGAGACAAGCATGGAAGCTCTGTCATGGACACTCAAGAATTTGGCTACTCACTCTACCATGGTTTATCTCATACATGTATTCCCAGAGATCAAACACATTCCAAATCCATTGGGAGTAGGAATGATTTCAAGGGATCAAGTGAGTGCTGAGCAAGTGGAGAGTTATATTGCACAAGAAAGAGGCAAGAGGAGAGAGCTCCTTCAGAAGTTCCTACAATCATGCTCTAATTCCCAGGTTAAGGTAGACACCATCCTGATTGAGAGTGACTTGGTTGCAAAGGCTATCCTTGACCTGATTCCCATTCTTCAAATAAAAAATTTAGTGATTGGAGCCAACAAATTTCATCTAAGAAAATCAAGATCAAGGAAAGGGAATGGCATAGCTGATCAGATACTGCAGAATGCATCACAAAGTTGCAAGGTGAGAATTATATGTGAAGGGAAGGAAGTAAATGAGCAGATGGTGTCACCCCTTCCACAGGTGCTTACTGGCACCTCTGATAATGATACTTCTATGACTAGAAAAGAAGAAAAGCAAAATGATTCGGTTTCATGTATTTGTTTCAAACCCAAGTTTAAGTGA 741 0.4184 MDNSQSQMFNYGNSGSGVSEIEEEDWETQHHDGSMAAISEEEEDCVYIAVGKSETSMEALSWTLKNLATHSTMVYLIHVFPEIKHIPNPLGVGMISRDQVSAEQVESYIAQERGKRRELLQKFLQSCSNSQVKVDTILIESDLVAKAILDLIPILQIKNLVIGANKFHLRKSRSRKGNGIADQILQNASQSCKVRIICEGKEVNEQMVSPLPQVLTGTSDNDTSMTRKEEKQNDSVSCICFKPKFK* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04613 246 Gene3D HUPs 34 206 IPR014729 -
Rops2g04613 246 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 4 246 - -
Rops2g04613 246 MobiDBLite consensus disorder prediction 1 20 - -
Rops2g04613 246 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 47 169 - -
Rops2g04613 246 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04613 Rops-Chr2 84091667 84093031 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04613 49 201 Plant U-box Gene Family AT5G57035 29.032 5.24e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04613 - - lja:Lj4g3v0097300.1 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04613 2 84091667 84093031 Rops11g01181 11 17336626 17338571 PCT