Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04612 ATGTCAACAAGATCATTGGAAACAAAGCATGATGAAGAAATCTCAAGTTTCAGTTGCAGTTTCATGGGGTTCAAGAGGAACCAAGTGTTTGATTACAGCGTTAGTAGTGATATAAAAGATGAAGAAGAGTCAGAGGAATTGTTTGAGATCAATCTGAAGGAGACTTTGGATACAATAAGAGAAGACTGTGAGAGCACTGTGTTCTCTCTTGATATTCACAAAGGAACGGATGTTGTGTATGTAGCAGTGGGAAGCCATGGAGATTCAAGCATGGAAGCACTTTCATGGGCCTTGAAACATGCCGTGACACCCTCTTCCACTGTCTGTCTCATACACGTTTTCCCTGAAGTCAAACTCATCCCAAGTCCATTGGGAAAAATTCCAAGGAATCATGTAAATCAAGAGCATGTTGACATCCACTTGACCAAAGAGAAAGGCAAGAGGAAATTGCTGCTTCAAAAGTTAATCGACCTATGCGTTGATTCAAAGATTAAGGTGGAAATGATGCTTATTGAAGGTGACAACGTTGCTAAAGCCATCGTGGACCTTGTAGGGAATCTTAATATAAGGAAATTGGTGATTGGAACTACCAAGTCTAATTTAAGAAAATCTGGGTCTGGAAAGCAAAATGCCATAGCGGACAAGGTACTAAAAAATGCGAAAGAAAGCTGTGATGTTAAAATCATATGCGAAGGAAGAGAAGTGATCGACCAGATGATTGGTTGCACTTCACCACGCTCCACAGACAGTATCAGTCCCAGATTTTCACATGAAGAAGAAGATAAATACCATGGTTTTGTCCCACTTAAGCGTTGGTGGTTATTTAGGTCCAGATTTCTATATCCTAGATGA 852 0.4026 MSTRSLETKHDEEISSFSCSFMGFKRNQVFDYSVSSDIKDEEESEELFEINLKETLDTIREDCESTVFSLDIHKGTDVVYVAVGSHGDSSMEALSWALKHAVTPSSTVCLIHVFPEVKLIPSPLGKIPRNHVNQEHVDIHLTKEKGKRKLLLQKLIDLCVDSKIKVEMMLIEGDNVAKAIVDLVGNLNIRKLVIGTTKSNLRKSGSGKQNAIADKVLKNAKESCDVKIICEGREVIDQMIGCTSPRSTDSISPRFSHEEEDKYHGFVPLKRWWLFRSRFLYPR* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04612 283 Gene3D HUPs 71 229 IPR014729 -
Rops2g04612 283 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 25 254 - -
Rops2g04612 283 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 87 203 - -
Rops2g04612 283 Pfam Universal stress protein family 79 221 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04612 Rops-Chr2 84080485 84082940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04612 79 232 U-box Gene Family AT2G45910 31.210 3.74e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04612 - - gmx:100799795 368.622