Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04611 ATGATGGACTCAAAAACTAGCGCTAGAGCTCCCCCAAAACACCATCAGAAGACGGCTGGGGTCCAAACCATAGAAACAAAAGACATCAAATCTTCTTCACCGCAGGTGCAGAAGACAGGCAAACCTGAACTGGCTGCTCCTGAAAGTTTATCAGAGTCTGTTCGAAACACATTGGATAAGAAAACTAGGGAAACTTCTGAAAACAAGGAGTTGGGAAAATCGAACCAAAAGTGGTTTGCTGATGTTTTGAGTAATGAATGTAGTTCTGGACCTTCTGGTGCTGCCTTACCTGCTCTTGACCAAGCATCTGGAGAAGTTGACCGTGCTGCTAATGAGAAGAAAGGCTTGCAGGAAAGCTTTATCGATCAAGAAAAAAAGACATCAGGATATGGAAGTGTGAAGAACAGTTCTGTTTCTGCCAAAGTTAGCGATGGGGCTAGCAGTCTTGCTAAGACCAGTGGAAGTGCCAAGATCAGTGATCGAGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTGCAGAGGAAGTACAAGCAGTGATATAAGTGATGAGAGTTCCTGTAGCAGCTTTAGTAGCAGCATTAACAAGCCTCATAAGGCAAATGATTTGAGATGGGAAGCTATCCAAGCTGTTCGAGCTAGAGATAGGGTATTGGGTTTAGGTCACTTTAGACTACTCAAGAGATTGGGTTGTGGGGATATTGGCAGTGTATATCTCTCTGAATTGAGTGGAGCTAAATGTTATTTTGCAATGAAGGTAATGGACAAAGGGTCCCTTGCTAGTCGTAAAAAGCTACTTCGTGCTCAAACAGAAAGAGAAATACTGCAGTCACTGGACCACCCCTTCCTCCCTACTTTGTATAGCCATTTTGAAACAGAGAAGTTCTCATGCTTAGTAATGGAATTCTGCCCAGGGGGAGACTTGCATACTCTTAGGCAGAGGCAGCCAGGGAAGCATTTCCCTGAGCAGGCAGCAAAGGGAAAAACTAGGTTTGAGTGTTTACATAGTTACATTAGGTCGTCATACCCTTTTCAGGATAATATACCTTCACCAGCTTCATCAGCCAGTGAAAAGGCTGTTTGTCATATGTCAATACCTAATCAGAAAGGTTCTGATAATTACCTTGAGTTTGATTTCTTCTAG 1143 0.4313 MMDSKTSARAPPKHHQKTAGVQTIETKDIKSSSPQVQKTGKPELAAPESLSESVRNTLDKKTRETSENKELGKSNQKWFADVLSNECSSGPSGAALPALDQASGEVDRAANEKKGLQESFIDQEKKTSGYGSVKNSSVSAKVSDGASSLAKTSGSAKISDRADFVESGKSSICRGSTSSDISDESSCSSFSSSINKPHKANDLRWEAIQAVRARDRVLGLGHFRLLKRLGCGDIGSVYLSELSGAKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYSHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAAKGKTRFECLHSYIRSSYPFQDNIPSPASSASEKAVCHMSIPNQKGSDNYLEFDFF* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04611 380 Gene3D Phosphorylase Kinase; domain 1 217 341 - -
Rops2g04611 380 MobiDBLite consensus disorder prediction 22 39 - -
Rops2g04611 380 MobiDBLite consensus disorder prediction 54 71 - -
Rops2g04611 380 FunFam Serine/threonine-protein kinase D6PK-like 221 306 - -
Rops2g04611 380 SUPERFAMILY Protein kinase-like (PK-like) 199 325 IPR011009 -
Rops2g04611 380 MobiDBLite consensus disorder prediction 1 73 - -
Rops2g04611 380 Pfam Protein kinase domain 224 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04611 380 SMART serkin_6 223 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04611 380 PANTHER FLIPPASE KINASE 1-RELATED 39 326 - -
Rops2g04611 380 Coils Coil 99 119 - -
Rops2g04611 380 ProSiteProfiles Protein kinase domain profile. 223 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04611 Rops-Chr2 84075240 84079451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04611 118 326 AGC Kinase Gene Family AT5G47750 87.081 4.00e-119 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops2g04611 Pkinase 1.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04611 K08286 - gmx:100798088 451.825