Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04600 ATGGCACCTGTCAGTTTAAGCAAAGAAGATGGAATGACTCATGACTATTTAGTTCACAGCAACTATATAGATCATTATAGCATATATGCTGATTTTGATCGAGTTACAGAAACTCATAATGAGTTTCTTCAATCCTATTTGGGAAGTTATGAGAAAGCAAAAGAGGCAATGATATATTCTTACACAAGGAATATCAATGGCTTTGCTGCCACCCTAGAAGAGGAAGAGGCTTCTGACATTGCAGAACATCCAAACGTTGTGTCAGTGTTTTTAAACCGAGGAAGAAAATTACACACTACACATTCATGGGAATTCATGTCACTGGAACAAAATGGTGTAGTTCCATCTGATTCCCTGTTTAGAAAAGGCAGATTTGGTGAAGATACTATTATTGGGAATCTTGACACTGGTGTATGGCCTGAATCTCCGAGCTTTAGAGATGAGGAGATAGGACCCATTCCTTCAAGGTGGAAAGGAGCTTGTCAGAGTGATATCACAGGCTTTCGTTGCAACAGGAAGCTCATAGGAGCAAGGTACTTCAACAAAGGTTATGCTGCCTATGCTGGGCCAAAGGCAATGATAAACAGCACGCTTAACACAGCACGAGATTATGAAGGTCATGGATCTCACACACTATCGACAATAGGAGGAAACTTTGTTCCTGGAGCAAATGTCTTTGGCTTGGGTAATGGAACTGCTAAAGGTGGTTCTCCTAAAGCCAGGGTTGCTACTTACAAAGTGTGCTGGCCACCAATTGGTGGCAATGAGTGCTTTGATGCTGATATCATGGCAGCCTTTGATATGGCTATACATGATGGGGTTGATATTCTTTCCCTCTCTCTAGGAGGGGCTGCTATGGATTACTTTGATGATGGTCTTTCAATTGGGGCATTTCATGCTGTCAAGAAGGGCATCACTGTATTATGCTCAGCTGGAAATTCTGGACCAACACCTGGAACTGTTTCAAATGTTGCACCTTGGATATTAACAGTTGGTGCTAGCACCTTGGACAGAGAGTTTGACACTATTGTTGAACTCCATAATGGACAGCACGTCAAGGGAGCCAGTCTTTCTAGAGCTTTGCCGAAACACAAGCTTTACCCGCTCATTAGTGCTGCACAGGCAAAACTGGCTAGAGCATCAATTGGAGACGCTATTCTCTGTAAGAAGGGAACAATTGACCCCCATAAGGCAAGAGGCAAAATATTGGTTTGTCTTAGAGGTGTCACTGCAAGAGTGGAAAAAAGCCTTGTTGCTTTGGAGGCTGGTGCAGCTGGGATGATTCTTTGTAATGATAAGCTCAGTGGTAATGAGCTTATTGCTGATCCTCATCTCCTGCCAGCATCACAAATCAATTATGAAGACGGTCTTGCTGTCTTTGCCTACATCAATTCAACCAAGAATCCGCTAGGATATATTCATCCACCCAAAACCAAGTTGAAGATAAAGCCTGCTCCAATCATGGCAGCTTTCTCCTCTAGAGGGCCCAACACAATCACACCAGAGATCCTCAAGCCTGATGTCACTGCTCCTGGTGTGAACATTATTGCTGCTTTCTCAGAAGCTATTAGCCCTACAGAGATGAACTTTGATAAGCGCAGGGTTCCTTTTATCACAATGTCTGGAACATCCATGTCCTGCCCTCATGTGGCTGGAGTTGTTGGTCTTCTCAAGACTCTCCACCCTGACTGGAGTCCATCAGCTATTAAATCTGCAATAATGACAACTGCTAGGACAAGGGACAATACCGCTAAGCCAATGCTTGATGGCGATTATGTTAAGGCAACACCTTTTGCCTATGGCTCTGGCCACATTAGACCCAATCGTGCGATGGATCCTGGCTTGGTCTATGACTTAACCATCATTGATTACCTAAACTTTGTATGTACCCTTGGTTATAACCAGACCCAGATAAAAATGTTCCATGGTATTCATCATTGTCCTGCAAAGATAGACATCCTGGATTTCAACTACCCTTCAATAACAATACCTAAACTCTACGGCTCAGTTACTTTGACCCGGAAGCTGAAGAATGTTGGTTCACCAGGCACATATACTGCTAGCCTCCGTGTACCCACAGGACTTTCGATATCTGTGGAGCCTAAGGTCTTGAAATTTGACAACATTGGTGAAGAGAAGAGCTTTAAGTTGACAATTGAAGTTACTAGATCAGGTGTGGCTACAGTTTTTGGAGGGCTAACTTGGTCAGATGGCAAACACTATGTGAGGAGTCCAATTGTAGTTGGGGGAGTTAAAGGTTAG 2262 0.4346 MAPVSLSKEDGMTHDYLVHSNYIDHYSIYADFDRVTETHNEFLQSYLGSYEKAKEAMIYSYTRNINGFAATLEEEEASDIAEHPNVVSVFLNRGRKLHTTHSWEFMSLEQNGVVPSDSLFRKGRFGEDTIIGNLDTGVWPESPSFRDEEIGPIPSRWKGACQSDITGFRCNRKLIGARYFNKGYAAYAGPKAMINSTLNTARDYEGHGSHTLSTIGGNFVPGANVFGLGNGTAKGGSPKARVATYKVCWPPIGGNECFDADIMAAFDMAIHDGVDILSLSLGGAAMDYFDDGLSIGAFHAVKKGITVLCSAGNSGPTPGTVSNVAPWILTVGASTLDREFDTIVELHNGQHVKGASLSRALPKHKLYPLISAAQAKLARASIGDAILCKKGTIDPHKARGKILVCLRGVTARVEKSLVALEAGAAGMILCNDKLSGNELIADPHLLPASQINYEDGLAVFAYINSTKNPLGYIHPPKTKLKIKPAPIMAAFSSRGPNTITPEILKPDVTAPGVNIIAAFSEAISPTEMNFDKRRVPFITMSGTSMSCPHVAGVVGLLKTLHPDWSPSAIKSAIMTTARTRDNTAKPMLDGDYVKATPFAYGSGHIRPNRAMDPGLVYDLTIIDYLNFVCTLGYNQTQIKMFHGIHHCPAKIDILDFNYPSITIPKLYGSVTLTRKLKNVGSPGTYTASLRVPTGLSISVEPKVLKFDNIGEEKSFKLTIEVTRSGVATVFGGLTWSDGKHYVRSPIVVGGVKG* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04600 753 Pfam Fibronectin type-III domain 655 748 IPR041469 -
Rops2g04600 753 SUPERFAMILY Subtilisin-like 97 615 IPR036852 GO:0004252|GO:0006508
Rops2g04600 753 CDD Peptidases_S8_3 96 577 IPR034197 -
Rops2g04600 753 Pfam Subtilase family 126 582 IPR000209 GO:0006508|GO:0008236
Rops2g04600 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 51 748 IPR045051 -
Rops2g04600 753 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Rops2g04600 753 Gene3D - 628 750 - -
Rops2g04600 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 3 98 IPR037045 -
Rops2g04600 753 Gene3D - 337 480 - -
Rops2g04600 753 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Rops2g04600 753 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Rops2g04600 753 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Rops2g04600 753 ProSiteProfiles Serine proteases, subtilase domain profile. 102 611 - -
Rops2g04600 753 FunFam Subtilisin-like protease SBT5.3 8 98 - -
Rops2g04600 753 CDD PA_subtilisin_like 344 473 - -
Rops2g04600 753 FunFam subtilisin-like protease SBT1.5 337 480 - -
Rops2g04600 753 Pfam PA domain 395 458 IPR003137 -
Rops2g04600 753 Pfam Peptidase inhibitor I9 31 98 IPR010259 -
Rops2g04600 753 Gene3D Peptidase S8/S53 domain 128 624 IPR036852 GO:0004252|GO:0006508
Rops2g04600 753 FunFam Subtilisin-like protease SBT1.5 128 355 - -
Rops2g04600 753 SUPERFAMILY PA domain 384 468 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04600 Rops-Chr2 83873417 83881176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04600 30 748 Subtilisin-like Serine Gene Family AT5G59810 64.779 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04600 - - gmx:100808488 1204.12