LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops2g04600	ATGGCACCTGTCAGTTTAAGCAAAGAAGATGGAATGACTCATGACTATTTAGTTCACAGCAACTATATAGATCATTATAGCATATATGCTGATTTTGATCGAGTTACAGAAACTCATAATGAGTTTCTTCAATCCTATTTGGGAAGTTATGAGAAAGCAAAAGAGGCAATGATATATTCTTACACAAGGAATATCAATGGCTTTGCTGCCACCCTAGAAGAGGAAGAGGCTTCTGACATTGCAGAACATCCAAACGTTGTGTCAGTGTTTTTAAACCGAGGAAGAAAATTACACACTACACATTCATGGGAATTCATGTCACTGGAACAAAATGGTGTAGTTCCATCTGATTCCCTGTTTAGAAAAGGCAGATTTGGTGAAGATACTATTATTGGGAATCTTGACACTGGTGTATGGCCTGAATCTCCGAGCTTTAGAGATGAGGAGATAGGACCCATTCCTTCAAGGTGGAAAGGAGCTTGTCAGAGTGATATCACAGGCTTTCGTTGCAACAGGAAGCTCATAGGAGCAAGGTACTTCAACAAAGGTTATGCTGCCTATGCTGGGCCAAAGGCAATGATAAACAGCACGCTTAACACAGCACGAGATTATGAAGGTCATGGATCTCACACACTATCGACAATAGGAGGAAACTTTGTTCCTGGAGCAAATGTCTTTGGCTTGGGTAATGGAACTGCTAAAGGTGGTTCTCCTAAAGCCAGGGTTGCTACTTACAAAGTGTGCTGGCCACCAATTGGTGGCAATGAGTGCTTTGATGCTGATATCATGGCAGCCTTTGATATGGCTATACATGATGGGGTTGATATTCTTTCCCTCTCTCTAGGAGGGGCTGCTATGGATTACTTTGATGATGGTCTTTCAATTGGGGCATTTCATGCTGTCAAGAAGGGCATCACTGTATTATGCTCAGCTGGAAATTCTGGACCAACACCTGGAACTGTTTCAAATGTTGCACCTTGGATATTAACAGTTGGTGCTAGCACCTTGGACAGAGAGTTTGACACTATTGTTGAACTCCATAATGGACAGCACGTCAAGGGAGCCAGTCTTTCTAGAGCTTTGCCGAAACACAAGCTTTACCCGCTCATTAGTGCTGCACAGGCAAAACTGGCTAGAGCATCAATTGGAGACGCTATTCTCTGTAAGAAGGGAACAATTGACCCCCATAAGGCAAGAGGCAAAATATTGGTTTGTCTTAGAGGTGTCACTGCAAGAGTGGAAAAAAGCCTTGTTGCTTTGGAGGCTGGTGCAGCTGGGATGATTCTTTGTAATGATAAGCTCAGTGGTAATGAGCTTATTGCTGATCCTCATCTCCTGCCAGCATCACAAATCAATTATGAAGACGGTCTTGCTGTCTTTGCCTACATCAATTCAACCAAGAATCCGCTAGGATATATTCATCCACCCAAAACCAAGTTGAAGATAAAGCCTGCTCCAATCATGGCAGCTTTCTCCTCTAGAGGGCCCAACACAATCACACCAGAGATCCTCAAGCCTGATGTCACTGCTCCTGGTGTGAACATTATTGCTGCTTTCTCAGAAGCTATTAGCCCTACAGAGATGAACTTTGATAAGCGCAGGGTTCCTTTTATCACAATGTCTGGAACATCCATGTCCTGCCCTCATGTGGCTGGAGTTGTTGGTCTTCTCAAGACTCTCCACCCTGACTGGAGTCCATCAGCTATTAAATCTGCAATAATGACAACTGCTAGGACAAGGGACAATACCGCTAAGCCAATGCTTGATGGCGATTATGTTAAGGCAACACCTTTTGCCTATGGCTCTGGCCACATTAGACCCAATCGTGCGATGGATCCTGGCTTGGTCTATGACTTAACCATCATTGATTACCTAAACTTTGTATGTACCCTTGGTTATAACCAGACCCAGATAAAAATGTTCCATGGTATTCATCATTGTCCTGCAAAGATAGACATCCTGGATTTCAACTACCCTTCAATAACAATACCTAAACTCTACGGCTCAGTTACTTTGACCCGGAAGCTGAAGAATGTTGGTTCACCAGGCACATATACTGCTAGCCTCCGTGTACCCACAGGACTTTCGATATCTGTGGAGCCTAAGGTCTTGAAATTTGACAACATTGGTGAAGAGAAGAGCTTTAAGTTGACAATTGAAGTTACTAGATCAGGTGTGGCTACAGTTTTTGGAGGGCTAACTTGGTCAGATGGCAAACACTATGTGAGGAGTCCAATTGTAGTTGGGGGAGTTAAAGGTTAG	2262	0.4346	MAPVSLSKEDGMTHDYLVHSNYIDHYSIYADFDRVTETHNEFLQSYLGSYEKAKEAMIYSYTRNINGFAATLEEEEASDIAEHPNVVSVFLNRGRKLHTTHSWEFMSLEQNGVVPSDSLFRKGRFGEDTIIGNLDTGVWPESPSFRDEEIGPIPSRWKGACQSDITGFRCNRKLIGARYFNKGYAAYAGPKAMINSTLNTARDYEGHGSHTLSTIGGNFVPGANVFGLGNGTAKGGSPKARVATYKVCWPPIGGNECFDADIMAAFDMAIHDGVDILSLSLGGAAMDYFDDGLSIGAFHAVKKGITVLCSAGNSGPTPGTVSNVAPWILTVGASTLDREFDTIVELHNGQHVKGASLSRALPKHKLYPLISAAQAKLARASIGDAILCKKGTIDPHKARGKILVCLRGVTARVEKSLVALEAGAAGMILCNDKLSGNELIADPHLLPASQINYEDGLAVFAYINSTKNPLGYIHPPKTKLKIKPAPIMAAFSSRGPNTITPEILKPDVTAPGVNIIAAFSEAISPTEMNFDKRRVPFITMSGTSMSCPHVAGVVGLLKTLHPDWSPSAIKSAIMTTARTRDNTAKPMLDGDYVKATPFAYGSGHIRPNRAMDPGLVYDLTIIDYLNFVCTLGYNQTQIKMFHGIHHCPAKIDILDFNYPSITIPKLYGSVTLTRKLKNVGSPGTYTASLRVPTGLSISVEPKVLKFDNIGEEKSFKLTIEVTRSGVATVFGGLTWSDGKHYVRSPIVVGGVKG*	754

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops2g04600	753	Pfam	Fibronectin type-III domain	655	748	IPR041469	-
	Rops2g04600	753	SUPERFAMILY	Subtilisin-like	97	615	IPR036852	GO:0004252\|GO:0006508
	Rops2g04600	753	CDD	Peptidases_S8_3	96	577	IPR034197	-
	Rops2g04600	753	Pfam	Subtilase family	126	582	IPR000209	GO:0006508\|GO:0008236
	Rops2g04600	753	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	51	748	IPR045051	-
	Rops2g04600	753	ProSitePatterns	Serine proteases, subtilase family, serine active site.	542	552	IPR023828	-
	Rops2g04600	753	Gene3D	-	628	750	-	-
	Rops2g04600	753	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	3	98	IPR037045	-
	Rops2g04600	753	Gene3D	-	337	480	-	-
	Rops2g04600	753	PRINTS	Subtilisin serine protease family (S8) signature	126	145	IPR015500	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops2g04600	Rops-Chr2	83873417	83881176	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops2g04600	30	748	Subtilisin-like Serine Gene Family	AT5G59810	64.779	0.0	966

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops2g04600	-		-	gmx:100808488	1204.12

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