Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04587 ATGGAGGATCGAGATCAAATTTCTCCGGCGGATTCGGTTGCCGTTAGTGAAGAGCAACAAGCCGCCGGAGTTGGCATTCTTCTTCAGATAATGATGTTGGTTTTATCATTCGTTTTAGGTCACGTTCTTCGTCGTAAGAAGATTTACATTCTTCCAGAAGCCAGCGCTTCTCTTCTCATTGGCTTACTCAAACCTTTCTTCTCTAATTTTGGAGCTATTGTTACATTTGCTATATTCGGTACCTTTATAGCTTCCATTGTAACCGGATTCTTAGTTTATCTTGGTGGGTTGATCTACCTTATGTTCAGACTACCGCTTGTTGAGTGCTTCATGTTTGGTGCTCTTATATCAGCAACTGATCCTGTTACTGTTTTGTCCATTTTTCAGGAGCTTGGCACAGATGTAAATCTATATGCTTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCTATTTCTTTGTACAGGACAATGTCATTGGTTAAAACTTATCCATCAGGACAAAATTTCTTCATGGTGGTTGTTAGATTTTTGGAGACTTTTGTGGGGTCAATGTCTGCTGGTGTTGGAGTTGGATTTATATCTGCTTTACTATTTAAGTATGCAGGGTTGGATATTGACAATCTTCAGAACTTGGAGAGCTGCCTTTTTGTTCTTTTCCCATATTTCTCGTACATGCTTGCAGAAGGTCTTGGCCTGTCTGGTATTGTGTCAATATTGTTCACAGGAGTGGTTATGAAGCATTACACATATTCAAATTTGTCACAAAATACTCGAAGATTTGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCAGAGACATTTGTATTTATCTACATGGGCTTTGATATTGCTATGGAGAAACATAGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATATTCATTGGAATTGCAAGGGCAGCCAATGTGTTCTTATGTGCTTATCTGGTCAACTTGGTCAGACCTGCGCATCAGCAGATACCTCCAAAACACCAGAAGGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCAATTCATGATCTTCCAGAAGGACATGGACAGACCATCTTCACTGCTACTACAGCAATAGTTGTTTTGACGGTATTACTGATTGGTGGTTCGACAGGCACCATGCTGGAAGCTTTAGAAGTTATAGGTAGTGACACTCATATTAATGATAGCCCTTCGGCTTCAGTCAGTACCATTACCATACCACCGAAGAATTTTGAGGGAAACAATGGTTATATTTCTTCTCCGAACAATGAAGAACCATCACCAGCGAACAAAATAAGGATGAAGCTACAAGAATTCCACAGGAGTGCTACATCTTTCACAGCATTAGATAAAAACTACCTCACCCCATTCTTTACTAGTCAAAATGGAGATACGGAAGAGGAAGTTGAGCTTCTAACTTCCGGAAGAGCGGGATTTCGCAGCCATGACCAAGACCATTTTTCGCCATGA 1500 0.4047 MEDRDQISPADSVAVSEEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYILPEASASLLIGLLKPFFSNFGAIVTFAIFGTFIASIVTGFLVYLGGLIYLMFRLPLVECFMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVKTYPSGQNFFMVVVRFLETFVGSMSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGVVMKHYTYSNLSQNTRRFVSAFFELISSLAETFVFIYMGFDIAMEKHSWSHVGFIFFSIIFIGIARAANVFLCAYLVNLVRPAHQQIPPKHQKALWYSGLRGAMAFALALQSIHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALEVIGSDTHINDSPSASVSTITIPPKNFEGNNGYISSPNNEEPSPANKIRMKLQEFHRSATSFTALDKNYLTPFFTSQNGDTEEEVELLTSGRAGFRSHDQDHFSP* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04587 499 PANTHER SODIUM/HYDROGEN EXCHANGER 64 481 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Rops2g04587 499 MobiDBLite consensus disorder prediction 479 499 - -
Rops2g04587 499 Pfam Sodium/hydrogen exchanger family 64 392 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Rops2g04587 499 Gene3D - 106 158 - -
Rops2g04587 499 MobiDBLite consensus disorder prediction 469 499 - -
Rops2g04587 499 NCBIfam sodium/hydrogen exchanger 3 64 406 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04587 Rops-Chr2 83742467 83748341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04587 13 468 Antiporters AT3G05030 28.571 6.95e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04587 K14724 - gmx:100790830 765.763