Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04580 ATGGATTTGTTGAAGTTGATAATGAGTGAAAGAATATTAGTAGTTCTGCTGCTTGTTTTTAAGTTTTTGTTGGTTGCAGAAGGAGAAACTGCTCATGAGGATTTGGCCACACTAAAGGCTCTTATGGATACATGGACAAACACCCCTCCTAATTGGGCGGGTTCAGATCCTTGTGATGATTGGGATGGAATTAAGTGCAAGAATTCACGTGTTACATCCATAACATTATCAAGCACTGGTTTGGCAGGCCAGCTTTCTGGAGATATTGGATCACTATCTGAATTGGAGACTCTGGATTTATCATCCAACAAGGACTTGATAGGAACGCTTCCACGATCCATTGGAGAGTTGAAGAAATTGTCAACCTTAATTCTTGTTGGTTGTGGCTTCAATGGTCCTATTCCAGACAACATAGGATATCTCGAGGAGCTTCGCTTCTTATCTTTAAATGCCAATAGCTTTAGTGGACAAATTCCACATTCTATTGGTAATTTATCAAAGCTCTATTGGTTAGATCTAGCTGACAATCAGCTTGAAGGGCCCCTCCCAGTATCTAGTGGCAGCATCTCCGGTCTTGATAAGTTACTCCATGCAAAGCATTTTCATCTTGGGAAGAATAAACTCTCAGGCAGTATTCCATCTCAACTTTTCAGCTGGGAAATGACTCTGATTCATCTACTTTTAGAAAGCAATCAACTCAACGGCAGCATTCCATCTACACTTGGACAAGTTCGGAGTCTGGAGGTGGTGCGCTTGGATGGTAATTCATTAAGTGGACCTGTACCTCCAAACATCAAAAATCTTACATATGTTCAAGATCTGTACTTGTCCAATAATAAACTGTCAGGCTCCCTGCCAAACCTTTCTGGAATGAATGTCCTCAGCTCCCTGGACATGAGCAACAACAGTTTTAAGCCTGTGGATTTTCCACTATGGTTTTCAACTCTCAAGTCTTTAACAACATTAAATATGGAGAGAACACAACTTCAAGGACAGGTTCCTACTTCTTTGTTTAGTCTTGTCAGTTTACAGACTGTGGTACTAAGGGACAACAAGATAAATGGAACCTTGGATATCGGCTCCACCAACAGCAACCAGCTGCGACTTATTGATTTGGAGACCAATTCAATTGACAACTTCAAGCAAAAAGAAGGAGTTTCAAATGTCAATATAATACTTAAAGATAACCCAATTTGTGAAGAAACTGAAGTAGTAGGGAACTACTGCTCCACTTTTCAACGTGATGTCTCATATACAACACCAACAAATAACTGTCAGTCTGGTACCTGCAATTCAGAACAGAATCCTAGCCCCAACTGTGCATGTGCATATCCATATACAGGAACCTTAACTTTCAGATCACCTTCCTTTTCCGACTTTGATAACAAAACTCACTACCAAATGCTTGAAGAGTCTCTTATTAAGTCTTTCAAGTCTCATGATCTACCTGTGGATTCAGTTTTGTTGAGCCATCCAACCAAGGATTCAAATCAGTATCTTAAATTGAGCTTACAAGTCTTCCCCTCAGGACAAGATCATTTCAATCGAACAGGGAGTCTTAGCATTGGTTTTCTGCTAAGCAACCAGACTTTTAAACCTACTAAAGATTTTGGACCATTTTATTTTATTGCAGATAAATATGAACACTTTGAGAATCCTGAAGGAAGTGGTAAATCTCCAAACATTGGAATCATAATTGGAGCAGCAGTTGGTGGTTTAGTCTTGCTAGTGTTATTACTCTTAGCAAGTGTTTATGCTTTTCGCCAAAAGAAAAGGGCTGAAAAAGCAATTGGACATAGCAATCCTTTTAGACGCTGGGATACAGCTGAGAGCAACAATGGCATGCCTCAGTTGAAAGAAGCAAGGCGGTTTTCTTTTGAAGAGCTTAAAAAATACTCCAAAAATTTTTCTCAAGCCAATGATATTGGATCTGGGGGTTTTGGAAAGGTTTATAAAGGAACCCTTCCCGATGGGAAACTGATAGCAATAAAACGAGCTCAAAAAAAATCTATGCAGGGAAAGATCGAGTTTAAAGCTGAGATTGAGCTCCTATCAAGGGTCCACCATAAGAATCTTGTTATCCTTTTGGGATTCTGCTTTGAGCAAAGAGAACAAATGCTGGTTTATGAGTATGTTCCTAATGGATCTTTGAAGGATACTATCTCAGGGAAATCAGGAATTAGATTGGACTGGATTAGAAGGCTAAAAGTTGCCCTTGGTGCTGCCCGGGGTTTGGCTTATCTTCATGAACATGCCAATCCCCCTATCATACATAGGGACATCAAATCAAACAATATTTTACTGGATGAGCGCCTAAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAGTCTATGGTTGATTCCGAAAAAGATCATGTTACCACTCAAGTTAAAGGGACAATGGGATACTTGGATCCAGAGTATTATATGTCTCAAAGATTGACTGAGAAGAGTGATGTTTATAGCTTTGGAGTGCTAATATTGGAGCTGATATCTGCAAGAAGGCCAATAGAACGGGGGAGGTATATTGTGAAAGAGGTTAGGGATGCAGTTGACAAGACAAAAGGCTTGTATGGTCTTCATGAAATCATTGATCCAACCATTGGTTTAGCATCCACACTGAGTGGTTTTGAGATGTTTGTGGATCTTGCCATGGGATGTGTTGAAGAGTCAGGAGCTGACAGGCCTAAAATGAGTGATGTGGTAAAGGAAATTGAAAGCATAATGCAGTTAGCTGGTGTAAACCCCAGTGATGAAACACCATCGATTTCTTCTAGTTATGAGGAGGTAAGTGGAGGGAGTTCTTCCCGCCATCCTTATAGCACCGAGTCCTTTGATTTGAGTGCAGGATTACCACATCCAAAAGTTGAACCTAAGTAA 2880 0.4017 MDLLKLIMSERILVVLLLVFKFLLVAEGETAHEDLATLKALMDTWTNTPPNWAGSDPCDDWDGIKCKNSRVTSITLSSTGLAGQLSGDIGSLSELETLDLSSNKDLIGTLPRSIGELKKLSTLILVGCGFNGPIPDNIGYLEELRFLSLNANSFSGQIPHSIGNLSKLYWLDLADNQLEGPLPVSSGSISGLDKLLHAKHFHLGKNKLSGSIPSQLFSWEMTLIHLLLESNQLNGSIPSTLGQVRSLEVVRLDGNSLSGPVPPNIKNLTYVQDLYLSNNKLSGSLPNLSGMNVLSSLDMSNNSFKPVDFPLWFSTLKSLTTLNMERTQLQGQVPTSLFSLVSLQTVVLRDNKINGTLDIGSTNSNQLRLIDLETNSIDNFKQKEGVSNVNIILKDNPICEETEVVGNYCSTFQRDVSYTTPTNNCQSGTCNSEQNPSPNCACAYPYTGTLTFRSPSFSDFDNKTHYQMLEESLIKSFKSHDLPVDSVLLSHPTKDSNQYLKLSLQVFPSGQDHFNRTGSLSIGFLLSNQTFKPTKDFGPFYFIADKYEHFENPEGSGKSPNIGIIIGAAVGGLVLLVLLLLASVYAFRQKKRAEKAIGHSNPFRRWDTAESNNGMPQLKEARRFSFEELKKYSKNFSQANDIGSGGFGKVYKGTLPDGKLIAIKRAQKKSMQGKIEFKAEIELLSRVHHKNLVILLGFCFEQREQMLVYEYVPNGSLKDTISGKSGIRLDWIRRLKVALGAARGLAYLHEHANPPIIHRDIKSNNILLDERLNAKVADFGLSKSMVDSEKDHVTTQVKGTMGYLDPEYYMSQRLTEKSDVYSFGVLILELISARRPIERGRYIVKEVRDAVDKTKGLYGLHEIIDPTIGLASTLSGFEMFVDLAMGCVEESGADRPKMSDVVKEIESIMQLAGVNPSDETPSISSSYEEVSGGSSSRHPYSTESFDLSAGLPHPKVEPK* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04580 959 FunFam Leucine-rich repeat protein kinase family protein 602 711 - -
Rops2g04580 959 FunFam Leucine-rich repeat protein kinase family protein 188 287 - -
Rops2g04580 959 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 712 921 - -
Rops2g04580 959 ProSitePatterns Protein kinases ATP-binding region signature. 642 664 IPR017441 GO:0005524
Rops2g04580 959 CDD STKc_IRAK 642 908 - -
Rops2g04580 959 MobiDBLite consensus disorder prediction 913 943 - -
Rops2g04580 959 Gene3D Transferase(Phosphotransferase) domain 1 712 925 - -
Rops2g04580 959 Gene3D Ribonuclease Inhibitor 29 188 IPR032675 -
Rops2g04580 959 Gene3D Ribonuclease Inhibitor 189 289 IPR032675 -
Rops2g04580 959 SUPERFAMILY Protein kinase-like (PK-like) 622 938 IPR011009 -
Rops2g04580 959 Gene3D Ribonuclease Inhibitor 290 443 IPR032675 -
Rops2g04580 959 MobiDBLite consensus disorder prediction 913 959 - -
Rops2g04580 959 ProSiteProfiles Protein kinase domain profile. 636 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04580 959 FunFam Leucine-rich repeat family protein 33 187 - -
Rops2g04580 959 SMART serkin_6 636 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04580 959 Pfam Protein kinase domain 637 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04580 959 PANTHER RECEPTOR-LIKE PROTEIN 55 39 908 - -
Rops2g04580 959 Gene3D Phosphorylase Kinase; domain 1 606 711 - -
Rops2g04580 959 SUPERFAMILY L domain-like 65 421 - -
Rops2g04580 959 ProSitePatterns Serine/Threonine protein kinases active-site signature. 756 768 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04580 Rops-Chr2 83673301 83680028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04580 8 959 Receptor kinase-like Gene Family AT5G49760 55.219 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops2g04580 Pkinase 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04580 - - gmx:100811702 1483