Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops2g04558 | ATGTCAGGAGAACCAGAAGAGAAGCAGAGAATTAATGTTGATGATTGTTTTGGATCAAACCTTATGGATCATGAAAGGGACCTTGAGACAGAAGGGGTGGTGTTGATGGGGAACAATGGCAGACAGGAAAGGACAGAGAAGGGCATGTATGGATCAGGATCAGGATCAGGATCAGGATCAGGAGAGAGGCTGAGAGAGCCTCTTCTTTTGAGGAATAACAAGATGAACACTACTTCCCAACTTGCCATTGTTGGAGCCAATGTTTGTTCTATTGAAAGTCTTGACTATGAGATCTTTGAGAATGATATTTTCAAGCAGGATTGGAGGTCTAGATCAAAGGCTGAGATAGGCCAATATGTTACCCTAAAATGGACCCTTGCACTTCTTATTGGTTTAGGCACAGGGCTTGTTGCCTTCTTCAATAACATTGGAGTTGAGAATATTGCTGGTTTCAAGCTTCTATTCACCAACAATCTCATGCTCAACCAAAAGTACAATCAGGCCTTTGCAGTATATGTTGGTTGTAACATGGTTTTAGCCATTGCTGCTGCAGCCCTATGTGCTTTCATTGCCCCTGCAGCAGCAGGGTCAGGGATACCTGAGGTGAAGTCATACCTCAATGGTGTAGATGCTCCTTCTATATTGGCTCCAAGTACCCTCTTTGTAAAGATTTTTGGTTCAATTTTTGGGGTGGCAGCCGGTTTTGTTGTGGGTAAGGAAGGACCTATGGTACATACTGGTGCTTGCATAGCTAGTTTACTTGGACAAGGTGGTTCTCAAAAATGTGGACTGACATGGAAGTGGCTCAGACATTTCAAAAATGACCGAGATAGAAGGGATATGATCACCTGTGGTGCAGCTGCTGGTGTTGCTGGTGCTTTCCGTGCCCCAGTTGGTGGTGTCCTTTTTGCACTTGAAGAAGCAGCTTCCTGGTGGAGGAGTGCTCTTTTGTGGAGGACTTTTTTTACGGCAGCTGTAGTAGCTGTAGTGCTTAGAGGTTTCATAGAGTTTTGCCGGGGTGGAAAATGTGGTCTTTTTGGGGAAGGAGGTTTGATAATGTTTGATGTCAATTCAGGAAAGCCTGCATACAGCATACCTGACCTCCTTGTAGTTATATTTCTTGGAGTTATTGGAGGTCTTTTGGGAAGCCTTTACAATTATCTTGTGGATAAGGTCCTTCGCACTTATAGCATCATAAATGAGAGAGGCCCTAAATTTAAAATTCTCCTTGTCATGATTATCTCCTTTTTAACCTCTTGCTGTTCATTTGGCCTTCCATGGCTATCAAAGTGCATCCCTTGTCCTTCTCACGCGGGGGATCAGTGTCCAACTGTAGGGCACTCTGGACACTACAAGAATTTTCAATGTCCACCAAACCACTACAATGACCTTGCCTCTCTCTTTTTTACTACCAATGATGATGCTATTCGTAACCTTTTTGTTGCTGGCTCTGATAAAAGATTTCTACTCTCTAGTCTTCTAATCTTCTTTGTGGCCATATACTTTCTTGGAATCATAACTTATGGCATTGCCATTCCCTCTGGATTATTCATTCCTGTCATACTTGCTGGAGCTTCATATGGTCGTGTTGCAGGAAGTCTCTTGAGTCCATTCAGTGTTCTTGATGTTGGTTTGTTTGCACTCCTTGGTGCTGCTTCATTCCTTGGTGGAACCATGAGAATGACTGTTTCTCTTTGTGTCATACTTCTTGAACTCACTAATAACCTTCTCATGCTCCCATTGGTGATGTTGGTTCTCCTTATTTCAAAGTCAGTGGCTGATTGTTTTAACAAAGGTGTTTATGATCAGATTGTGGAAATGAAGGGGTTACCTTATATGGATGCACATCCTGAACCATACATGAGGCAGTTAGTTGCAAGTGATGTTGTTTCTGGTCCCTTGTTTACATTTTCTGGGATTGAAAAAGTGGGGAATATTGTGCATACTTTAAGGGTCACAGGACATAATGGTTTTCCTGTGATTGATGAGCCTCCTTTCTCAGATGCTCCTGAGTTGTGTGGGTTGGTTTTGAGGTCTCATCTGCTTGTACTTCTTAAACATAGGACATTTACAAAGGAAAGGGGTATGAGTGGTTCCTCTATTATGAAGAAGTTTAAGGCACATGATTTTGCAAAGCCAGGTTCAGGCAAAGGGATCAAGCTTGATGCTTTAGACATTTCTGAGGATGAGATGGAAATGTATGTTGATCTGCATCCTATAACTAATAGGTCACCATATACAGTAGTGGAAACAATGTCTCTAGCTAAAGCTGCTACTCTTTTCCGCGAGCTTGGCCTCAGGCACTTGTTGGTGGTTCCAAAGACATCAGGGAGGCATCCAGTTGTTGGGATCCTGACAAGGCATGATTTCATGCCTGAGCATATATTGGGACTATACCCTCACTGCAACAACACATACAAATAG | 2424 | 0.4282 | MSGEPEEKQRINVDDCFGSNLMDHERDLETEGVVLMGNNGRQERTEKGMYGSGSGSGSGSGERLREPLLLRNNKMNTTSQLAIVGANVCSIESLDYEIFENDIFKQDWRSRSKAEIGQYVTLKWTLALLIGLGTGLVAFFNNIGVENIAGFKLLFTNNLMLNQKYNQAFAVYVGCNMVLAIAAAALCAFIAPAAAGSGIPEVKSYLNGVDAPSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIASLLGQGGSQKCGLTWKWLRHFKNDRDRRDMITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWRTFFTAAVVAVVLRGFIEFCRGGKCGLFGEGGLIMFDVNSGKPAYSIPDLLVVIFLGVIGGLLGSLYNYLVDKVLRTYSIINERGPKFKILLVMIISFLTSCCSFGLPWLSKCIPCPSHAGDQCPTVGHSGHYKNFQCPPNHYNDLASLFFTTNDDAIRNLFVAGSDKRFLLSSLLIFFVAIYFLGIITYGIAIPSGLFIPVILAGASYGRVAGSLLSPFSVLDVGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKSVADCFNKGVYDQIVEMKGLPYMDAHPEPYMRQLVASDVVSGPLFTFSGIEKVGNIVHTLRVTGHNGFPVIDEPPFSDAPELCGLVLRSHLLVLLKHRTFTKERGMSGSSIMKKFKAHDFAKPGSGKGIKLDALDISEDEMEMYVDLHPITNRSPYTVVETMSLAKAATLFRELGLRHLLVVPKTSGRHPVVGILTRHDFMPEHILGLYPHCNNTYK* | 808 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops2g04558 | 807 | Pfam | CBS domain | 742 | 790 | IPR000644 | - | |
| Rops2g04558 | 807 | Pfam | Voltage gated chloride channel | 180 | 594 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
| Rops2g04558 | 807 | ProSiteProfiles | CBS domain profile. | 741 | 805 | IPR000644 | - | |
| Rops2g04558 | 807 | CDD | CBS_pair_voltage-gated_CLC_euk_bac | 626 | 793 | - | - | |
| Rops2g04558 | 807 | SMART | cbs_1 | 744 | 795 | IPR000644 | - | |
| Rops2g04558 | 807 | SMART | cbs_1 | 633 | 686 | IPR000644 | - | |
| Rops2g04558 | 807 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 71 | 796 | - | - | |
| Rops2g04558 | 807 | Gene3D | - | 614 | 792 | IPR046342 | - | |
| Rops2g04558 | 807 | SUPERFAMILY | CBS-domain pair | 616 | 791 | IPR046342 | - | |
| Rops2g04558 | 807 | Gene3D | Clc chloride channel | 116 | 613 | - | - |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops2g04558 | K05016 | - | cave:132178584 | 1154.43 |
Showing 1 to 1 of 1 entries