Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04556 ATGAGAGCGAAAATAGCAACTATGGATGAAGAAGAGAGAGTCACACCATTTGTGCTTCGGAAGAACGCTCGCACTATCTTAATCAAGAGTTGCACGTTTTTCCTCGAAGCCATGGCGTTGATCCTGCATGCAGGGAAAACAAACAAAAATGCTTACAAGGCACTCATTGCAGCGGAGTATGCTGGTGTTCAAGTTGAATTGGCCCCAAACTTTGAAATGGGTGTCTCCAATAAAACACCTGAATTTCTCAAGATGAATCCTCTTGGCAAGGTTCCTGTGTTGGAAACCCCAGATGGTCCAGTATTTGAGAGCAATGCCATTGCTCGTTATGTTGCTCGATTGAAGGGTGACAACACTTTGTATGGATCTTCTTCTATTGAATATGCCCACATTGAACAATGGATTGATTTTTCATCATTGGAGATTGATGCTAATCTTAGTAAGTGGTACTACCCTAGAAGGGGATTTGTACCATACCTTCCTCCAGCTGAGGAGACTGCAATTTCGGCTCTGAAGAGAGCTTTAGATGCTTTGAACACTCACCTTGCCTCCAACACCTACCTCGTTGGACATTCTGTGACCCTGGCTGACATCATATTGACATGCAATTTGTATTTTGGTTTCTCTAGTATCTTGGTGAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAATCAGCCAAATTTCCGAAAGATATTAGGTCAGGTCAAGCAGACTGAAGCAGTACCACCTGTTCAATCTGCAAAGAAGCCTTCCCAGTCATCTAAGCCAAAAGAATCTAAGCCCAAGGCCAAGGATGAACCTAAGAAAGAGGCCAAGAAGGAGGCAGAAAAACCCAAAGAAGAAGCAGAAGAGGAGGCACCCAAGCCAAAACCCAAGAATCCCCTTGATCTTCTTCCTCCAAGTAAGATGATACTGGATGAGTGGAAAAGACTCTACTCAAATACCAAAACCAACTTCCGGGAGGTTGCGATCAAAGGATTTTGGGATATGTATGATCCTGAAGGATACTCTCTCTGGTTCTGTGATTACAAATACAATGATGAGAACACTGTTTCATTTGTAACAATGAACAAGGTTGGTGGATTTCTTCAGCGGATGGATTTGGCCCGGAAGTATGCCTTTGGAAAGATGCTTGTGATTGGATCAGTGTCACCATTTAAGGTGAAGGGATTGTGGCTTTTCCGTGGCCAAGAAATCCCACAATTCGTTATTGATGAATGCTATGACATGGAGCTCTATGAATGGACTAAGGTTGATATCTCTGATGAAGCTCAAAAGGAACGTGTCAATCAGATGATTGAAGATTGTGAACCTTTTGAGGGAGAGCCTCTTTTGGATGCCAAGTGCTTCAAGTGA 1380 0.4319 MRAKIATMDEEERVTPFVLRKNARTILIKSCTFFLEAMALILHAGKTNKNAYKALIAAEYAGVQVELAPNFEMGVSNKTPEFLKMNPLGKVPVLETPDGPVFESNAIARYVARLKGDNTLYGSSSIEYAHIEQWIDFSSLEIDANLSKWYYPRRGFVPYLPPAEETAISALKRALDALNTHLASNTYLVGHSVTLADIILTCNLYFGFSSILVKSFTSEFPHVERYFWTLVNQPNFRKILGQVKQTEAVPPVQSAKKPSQSSKPKESKPKAKDEPKKEAKKEAEKPKEEAEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLARKYAFGKMLVIGSVSPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDISDEAQKERVNQMIEDCEPFEGEPLLDAKCFK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04556 459 SUPERFAMILY GST C-terminal domain-like 110 251 IPR036282 -
Rops2g04556 459 FunFam Elongation factor 1 gamma 117 253 - -
Rops2g04556 459 CDD GST_N_EF1Bgamma 42 114 - -
Rops2g04556 459 SUPERFAMILY eEF1-gamma domain 299 459 IPR036433 GO:0003746|GO:0006414
Rops2g04556 459 MobiDBLite consensus disorder prediction 247 306 - -
Rops2g04556 459 SFLD Glutathione Transferase (cytosolic) 42 227 IPR040079 -
Rops2g04556 459 FunFam Elongation factor 1-gamma 1 299 459 - -
Rops2g04556 459 MobiDBLite consensus disorder prediction 261 299 - -
Rops2g04556 459 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 299 459 IPR001662 GO:0003746|GO:0006414
Rops2g04556 459 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 38 459 IPR044628 GO:0004364
Rops2g04556 459 SFLD Main (cytGST) 42 227 - -
Rops2g04556 459 SMART EF1G_2 298 406 IPR001662 GO:0003746|GO:0006414
Rops2g04556 459 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 299 459 IPR036433 GO:0003746|GO:0006414
Rops2g04556 459 Pfam Glutathione S-transferase, C-terminal domain 166 234 IPR004046 -
Rops2g04556 459 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 124 252 IPR010987 -
Rops2g04556 459 FunFam Elongation factor 1B gamma 38 111 - -
Rops2g04556 459 Gene3D - 117 253 - -
Rops2g04556 459 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 38 119 IPR004045 -
Rops2g04556 459 SUPERFAMILY Thioredoxin-like 35 122 IPR036249 -
Rops2g04556 459 Gene3D Glutaredoxin 37 111 - -
Rops2g04556 459 Pfam Elongation factor 1 gamma, conserved domain 298 406 IPR001662 GO:0003746|GO:0006414
Rops2g04556 459 CDD GST_C_EF1Bgamma_like 127 247 - -
Rops2g04556 459 Pfam Glutathione S-transferase, N-terminal domain 39 113 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04556 Rops-Chr2 83288806 83298534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04556 38 459 Eukaryotic Initiation Factors Gene Family AT1G57720 75.829 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04556 K03233 - gmx:547637 697.197