Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops2g04554 | ATGTCGTCAAGCTTCATGAAAGAGGAAGATTCTAACCCAAATGTTGAGTTTACTGATGAAAATGTAAAGAGCAACCCAGATAGAGCTCAAGAGAATAATAACTTGAGATCCATAAATGACATGTCTCAAACTATTTTCCTTTTCAAGAAATACTTGCCCACTAGGGGTCAAAGTAGCATCAGAAAAACAAACACAGAAGAATCAGAAATAATCAAAAGGTGTCCCCCCAATGCCCTATTACCACATCCACCAAAATGTGAACCCGGGTTTCAAAGGCAAGCTTCTTTACTAGAGCAAAGGCTTCTTCCACAATTGAGGTGTGATGGAGCACCTTCATCTGTGTCAGAAGATAGGTCTTCAACAGCACAACTTACAATATTTTATGGAGGTGCTATAAATGTTTACGATAACATTCCTGCTGACAAGGCTCAAGCTATCATGCTTCTAGCTAGTGAGAGCTCATTATCAAATATTATAGGAACAGAAATTCCAAAAGCGCATACAAAAGTACCATCTTATCGATCTAATGTGACACTGATAAACAAATCAAAAACAGAGATTCAGATAGCAAGAAAGTATTCTCTTCAATGTTTCCTCAAGAAACGTCGAAACAGGATACTTAACAGATCACCCCATGCGTCTCCTAGCAAAAACTCATGTTCAAGGAAAATGGCTGACATGACATGGAAAGTCCCATTCGGTTCTATCAGTTCAGATTTGTGA | 723 | 0.3845 | MSSSFMKEEDSNPNVEFTDENVKSNPDRAQENNNLRSINDMSQTIFLFKKYLPTRGQSSIRKTNTEESEIIKRCPPNALLPHPPKCEPGFQRQASLLEQRLLPQLRCDGAPSSVSEDRSSTAQLTIFYGGAINVYDNIPADKAQAIMLLASESSLSNIIGTEIPKAHTKVPSYRSNVTLINKSKTEIQIARKYSLQCFLKKRRNRILNRSPHASPSKNSCSRKMADMTWKVPFGSISSDL* | 241 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops2g04554 | 240 | SMART | tify_2 | 117 | 152 | IPR010399 | - | |
Rops2g04554 | 240 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Rops2g04554 | 240 | Pfam | tify domain | 119 | 151 | IPR010399 | - | |
Rops2g04554 | 240 | MobiDBLite | consensus disorder prediction | 12 | 26 | - | - | |
Rops2g04554 | 240 | ProSiteProfiles | Tify domain profile. | 117 | 152 | IPR010399 | - | |
Rops2g04554 | 240 | PANTHER | PROTEIN TIFY 4A-RELATED-RELATED | 36 | 221 | IPR040390 | - | |
Rops2g04554 | 240 | Pfam | Jas motif | 188 | 211 | IPR018467 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops2g04554 | Rops-Chr2 | 83271494 | 83272749 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops2g04554 | 123 | 212 | Tify Gene Family | AT5G20900 | 33.645 | 5.33e-14 | 66.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Tify | Rops2g04554 | tify | 1.8e-17 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops2g04554 | K13464 | - | qsu:112020895 | 189.119 |