Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04523 ATGGCGTCGTCTTCTTCTCTCGGCCTGCGTGTGTGTTTGTTGCTGTTTGTGATTGCGGTGAGCGCCGACGATGTGAAACGGGACTATGAGAGGGCTCCCAAGTCCGAATCCTGTAACAACCCCTTCCAATTGCTAGTTACTCAACTCAAGACACAGATGGCTGACAATAAGGTTGAGGAGCAACAAAACCAGCTCATCGGCCATCAAGATCTCACTCATAAGACTCTCCTTCAAAGTGATGCGCTCTATCAGTATATACTTGAAACCAGTGTGTTTCCAAGAGAGCACGCGAGCTTGAAGGAGCTCCGTGAGATGACAGAAAAACACCCTCGGAACGTCATGGCTACACCATGTGACGAAGGACAACTTATAAGTATGCTGCTTAAGCTCATCAATGCCAAGAACACCTTGGAAATTGGTGTCTACACTGGTTACTCTCTCCTCTCCACTGCCCTCGCTCTTCCCCATGATGGAAAGATCTTGGCTATGGACGTGAACCGTGAATACTATGAGCTGGGATTGCCCATAATTGAAAAAGCTGGAGTGGCTCACAAGATTGACTTCAGAGAAGGACCTGCTCTTCCTCTTCTTGACGAACTGGTTAATGATGAAAGTAACAAGGGATCATTCGATTTCGTATTTGTGGACGCTGATAAGAATAACTACTTGAACTATCATCAGAGGGTGATTGAGCTTGTGAAGGTTGGGGGACTGATCGGGTACGATAACACCCTATGGTTTGGATCTGTGGCGGCCCCACCTGACTCTCCGATGTTGGATTTCGTCAAGGAATTACGGGGTTACGTGATTGAGCTCAACAAGTATCTCGCTCTTGATTCAAGGATTGAGATTTGCCAGCTTCCCGTTGGTGATGGGATTACCCTGTGCCGCCGCATTATCTGA 903 0.4762 MASSSSLGLRVCLLLFVIAVSADDVKRDYERAPKSESCNNPFQLLVTQLKTQMADNKVEEQQNQLIGHQDLTHKTLLQSDALYQYILETSVFPREHASLKELREMTEKHPRNVMATPCDEGQLISMLLKLINAKNTLEIGVYTGYSLLSTALALPHDGKILAMDVNREYYELGLPIIEKAGVAHKIDFREGPALPLLDELVNDESNKGSFDFVFVDADKNNYLNYHQRVIELVKVGGLIGYDNTLWFGSVAAPPDSPMLDFVKELRGYVIELNKYLALDSRIEICQLPVGDGITLCRRII* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04523 300 PANTHER O-METHYLTRANSFERASE-RELATED 71 299 - -
Rops2g04523 300 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 75 299 IPR002935 GO:0008171
Rops2g04523 300 FunFam Caffeoyl-CoA O-methyltransferase 1 68 300 - -
Rops2g04523 300 Gene3D Vaccinia Virus protein VP39 65 300 IPR029063 -
Rops2g04523 300 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 79 298 IPR029063 -
Rops2g04523 300 Pfam O-methyltransferase 89 299 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04523 Rops-Chr2 82537065 82539231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04523 56 299 Monolignol Biosynthesis Gene Families AT4G34050 72.951 1.01e-136 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04523 K00588 - gmx:100795858 417.157