Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04520 ATGTCTCGTTGCTTTTTCTTCTTTCAAACCCCACTCTGCGACTCCCATTCCAAATCCCTAATCCCCAATTTCTCTTTCACTCTCTCTCAACAATTCATCTCCAATCCATGGATTGCAAGCTCCATGTCAGCTTCCAATTTCACCCAACATACGAAGAGCTCGTCAGCTTCTACTAGAGATACCTTTAAAATACTTGATACAAGATGGAGGCTATTTGTTTATAGTTTGGTGCTTCATCTAGGAGCTATCATGAGGATTGAGATTGGGAAAATCTTATTACGAATATTTCAGAGTGTTTTGGGTATTTCTTGCCGTGGAAAAAACTCTTCCAAGTCCAAAAGAAAATTAAGACAAGTATACAACACAGAGATGGCTGACAATAAGGTTGAGGAGCAACAAAACCAGCCCATCGGCCATCAAGATCTCACTCATAAGACTCTCCTTCAAAGTGATGCACTCTATCAGTATATACTTGAAACCAGTGTGTTTCCAAGAGAGCATGCGAGCTTGAAGGAGCTCCGCGAGATGACAGAAAAACACCCTTGGAACGTCATGGCGACACCATGTGACGAAGGACAACTTTTAAGTATGCTGCTTAAGCTCATCAATGCCAAGAACACCTTGGAAATTGGTGTCTACACTGGTTACTCTCTCCTCTCCACTGCCCTCGCTCTTCCCCATGATGGAAAGATCTTGGCTATGGATGTGAACCGTGAATACTATGAGCTGGGTTTGCCCATAATTGAAAAAGCTGGAGTGGCTCACAAGATTGACTTCAGAGAAGGACCTGCTCTTCCTCTTCTTGACGAACTGGTTAATGATGAAAGTAACAAGGGATCATTCGATTTCGTATTTGTGGACGCTGATAAGAATAACTACTTGAACTATCATCAGAGGGTGATTGAGCTTGTGAAGGTTGGGGGACTGATCGGGTACGATAACACCCTATGGTTTGGATCTGTGGCGGCCCCACCTGACGCTCCGATGTTGGATTTCGTCAAGGAATTACGGGGTTACGTGATTGAGCTCAACAAGTATCTCGCTCTTGATTCAAGGATTGAGATTTGCCAGCTCCCCGTTGGTGATGGGATTACCCTGTGTCGCCGCGTCATCTGA 1116 0.4435 MSRCFFFFQTPLCDSHSKSLIPNFSFTLSQQFISNPWIASSMSASNFTQHTKSSSASTRDTFKILDTRWRLFVYSLVLHLGAIMRIEIGKILLRIFQSVLGISCRGKNSSKSKRKLRQVYNTEMADNKVEEQQNQPIGHQDLTHKTLLQSDALYQYILETSVFPREHASLKELREMTEKHPWNVMATPCDEGQLLSMLLKLINAKNTLEIGVYTGYSLLSTALALPHDGKILAMDVNREYYELGLPIIEKAGVAHKIDFREGPALPLLDELVNDESNKGSFDFVFVDADKNNYLNYHQRVIELVKVGGLIGYDNTLWFGSVAAPPDAPMLDFVKELRGYVIELNKYLALDSRIEICQLPVGDGITLCRRVI* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04520 371 Gene3D Vaccinia Virus protein VP39 137 371 IPR029063 -
Rops2g04520 371 Pfam O-methyltransferase 160 370 IPR002935 GO:0008171
Rops2g04520 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 150 369 IPR029063 -
Rops2g04520 371 PANTHER O-METHYLTRANSFERASE-RELATED 142 370 - -
Rops2g04520 371 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 146 370 IPR002935 GO:0008171
Rops2g04520 371 FunFam Caffeoyl-CoA O-methyltransferase 1 139 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04520 Rops-Chr2 82500022 82519541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04520 127 370 Monolignol Biosynthesis Gene Families AT4G34050 73.770 7.86e-139 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04520 K00588 - gmx:100795858 422.165