Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04519 ATGGCAGACAATAAGGTAGAGGAGCAACAAAACCAACTCATCGGCCACGAAGACATCACTCATAAGAATCTCCTTCAGAGCGATGCACTCCATAAGTATATACTAGAAACCAGTGTGTTTCCAAGAGAGCACGCGAGCTTGAAGGAGCTCCGCGAGATGACAGAAAAACACCCTCGGAACCTCATGGCTATACCACCTGACGAAGGACAACTTATAAGTATGCTGCTTAAGCTCATCAATGCCAAAAACACCTTGGAAATTGGTGTCTACACTGGTTACTCTCTCCTCTCCACTGCCCTCGCTCTTCCCCATGATGGAAAGATCTTGGCTATGGACGTGAACCGTGAATACTATGAGCTGGGATTTCCCATAATTGAAAAAGCTGGAGTGGCTCACAAGATTGACTTCAGAGAAGGACCTGCTCTTCCTCTTCTTGACGAACTGGTTAAAGATGAAAGTAACAAGGGAGCATTCGATTTCGTATTTGTGGACGCCGATAAGAATAACTACTTGAACTATCATCAGAGGGTGATTGAGCTTGTGAAGGTTGGAGGACTGATCGGGTACGATAACACCCTATGGTTTGGATCTGTGGCGGTCCCACCTGACGCTCCGATGATGGATTCCGTCAAGGAATTACGGGGTTACGTGATTGAGCTCAACAAGTATCTCGCTCTTGATTCTAGGATTGAGATTTGCCAGCTTCCCGTTGGTGATGGGATTACCCTGTGCCGTCGCATCCTCTGA 747 0.4699 MADNKVEEQQNQLIGHEDITHKNLLQSDALHKYILETSVFPREHASLKELREMTEKHPRNLMAIPPDEGQLISMLLKLINAKNTLEIGVYTGYSLLSTALALPHDGKILAMDVNREYYELGFPIIEKAGVAHKIDFREGPALPLLDELVKDESNKGAFDFVFVDADKNNYLNYHQRVIELVKVGGLIGYDNTLWFGSVAVPPDAPMMDSVKELRGYVIELNKYLALDSRIEICQLPVGDGITLCRRIL* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04519 248 Gene3D Vaccinia Virus protein VP39 13 248 IPR029063 -
Rops2g04519 248 Pfam O-methyltransferase 37 247 IPR002935 GO:0008171
Rops2g04519 248 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 247 IPR002935 GO:0008171
Rops2g04519 248 PANTHER O-METHYLTRANSFERASE-RELATED 20 247 - -
Rops2g04519 248 FunFam Caffeoyl-CoA O-methyltransferase 1 16 248 - -
Rops2g04519 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 246 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04519 Rops-Chr2 82495335 82514833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04519 4 247 Monolignol Biosynthesis Gene Families AT4G34050 70.902 7.50e-132 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04519 K00588 - gmx:100795858 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04519 2 82495335 82514833 Rops2g04519 2 82495335 82514833 ECH