Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04516 ATGAACCACGTGGTTGCAGACGGCAAGTCGTTTTGGCATTTCTTCAATTCTTGGGCTGAAATCTCACGTGGTGGCCTTAAATCAAAACTCCCTGCACTGGAACGTTGGTTCCTGGATGGCATTGATCCTCCCATACGGTTTCCTTTCACAATGGAGGCAGACACTAAGCAATACTCTGAAAGCCTCAACAAACCAGTTGAGAGGTTCTTCCATTTCACTAAGGAGAAAATTGCGCAACTCAAATTAAAAGCTAACACAGAAGCCCATACCGACAAAATATATTCTCTGCAAGCGCTTTTAACTCACCTTTGGCGCTCTGTGATCCGTTGTGAACGATTTGACCCACAAGAAGAGGTCCATTATGCCTTGGTGATAGACGTTAGACCCAGGATGGTTCCGCCATTGCCAGAGGATTATTTTGGAAATGCGATGCTGTTTGGTCGTGTCACCATGAAAGCAAGGGAGCTACTAGAGGAGGGTGGGCTCGGCAAGGGTGCTTTGGAGATGAACAAGATGATTGGTTTGCACTCTGATGACAAGATAAAGAACCACTATGAGTCTTGGGTGAGAAACCCTAAGGCTGATTTCTATGCAGGGTATCGTGGCCACAAGAAATTCCTTGGGCATCTCCAAGGTTCAATGTTTACGGTAATGATTTTGATTGGGGAAAGCCTGTGGCTGTTCGAAGTGGCGGTGCACATAAAAAAATATGGATTGATTACACTGTTTGCTGGGGCAGAACAAGGTAGTATCGACATTGAAGTGTGCCTTCCTCACGAGACTTTAGAGGCCATGGGAAATGACCATGAGTTCATGGATGCCGTTTGCAACTAA 834 0.458 MNHVVADGKSFWHFFNSWAEISRGGLKSKLPALERWFLDGIDPPIRFPFTMEADTKQYSESLNKPVERFFHFTKEKIAQLKLKANTEAHTDKIYSLQALLTHLWRSVIRCERFDPQEEVHYALVIDVRPRMVPPLPEDYFGNAMLFGRVTMKARELLEEGGLGKGALEMNKMIGLHSDDKIKNHYESWVRNPKADFYAGYRGHKKFLGHLQGSMFTVMILIGESLWLFEVAVHIKKYGLITLFAGAEQGSIDIEVCLPHETLEAMGNDHEFMDAVCN* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04516 277 Gene3D - 54 276 IPR023213 -
Rops2g04516 277 Gene3D - 1 53 IPR023213 -
Rops2g04516 277 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 272 - -
Rops2g04516 277 Pfam Transferase family 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04516 Rops-Chr2 82465462 82466985 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04516 1 159 Monolignol Biosynthesis Gene Families AT5G48930 28.824 9.56e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04516 - - lja:Lj0g3v0319259.1 298.516