Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04514 ATGGCAGGCATCCGACTCATTTCGACTAGTACAATCCAAGCAACAAATCACGGTGACTTAACTCAGAAAATCGATCTAACTCCATGGGATCTCCAATTACTCAAAATCGAAGCAATCCAACAAGGGCTTCTTTTTCACAAACCCAAAATAGAAGATACATCAAACCAAATCCAGCACCTAAAAAACTCCCTTTCCTCCACTCTTAACTTCTTTCCACCCCTCGCGGGCCGTCTCATCATTACGGAGCATGAAGACAACACTGTCTCCTCTTTCATCGCCTGCAACAATGTAGGTGCACTGTTTGTCCATGCTGCAGCAGAGAACACTAGCGTTGCTGACATCCTTCAACCCAATTATGTTCCTTCCATTGTACACTCCTTCTTTCCACTAAACGGAGTTAGAAACTATGAAGGCACATCACAGCCATTGCTGGCAATGCAAGTGACGGAGCTGGTTGACGGCATCTTCATTGGCTTCGCAATGAACCACGTGGTTGCTGACGGCAAGTCGTTTTGGCAATTCATCAATTCTTGGGCTGAAATCTCGCGGGGTTTCGATAAAGTAATCAAACTCCCCACGACGTTTCATCGTTGGTTTCCAGATGGCGTGGACCTTCCCATACGCATTCCTTTCACAAAGGAGGAGAAGCAAGTGTATGAAAACTATAAACAGCAACTGCCACCTCATCGGATCTTCCATTTCACGAAAGAGAAAATTGCCCAACTCAAATCAAAAGCTAATGCAGATGTTGGCACGGAAAGAATATCTTCTTTGCAAGCACTTCTAACTCACATTTGGCGTTATGTGATCCGTAGCCAATGTCTTGACCCACAAAGAGAGACCAGTTACAAGTTACTCATAGATGTTAGGTCGAGAATGTGCCCACCATTGCCAGAGAATTATTTTGGAAACGCAGGAATGATAGGCCTTGTTACCATGAAAGCAGAGGAACTGTTGGAAGGTGGGCTCGGCAAGGGTGCTTGGGAAATGAACAAGATGATTTCTTTGCAATCTGATGAAAAGGTAAAGAAACGCTATGAGTCTTTGTTGGAAACCCCATTTCTGATAACGCCGGGAACGGCTTCTAGAAGTGATGCTTTGCTCACCAACAGTTCCCCAAGGTTCAACTTTTATGGTAACGACTTTGGTTGGGGAAAGCCTGTGGCAGTTCGAAATGGGGTTGCAAACAAAAGTAGTGGTAAAATTACTGCGTTTGGTGGAGCAGAAGAAGGTAGTATTGACATTGAAGCTTGTCTTCCTTACGAGATTTTGGAGGCCATGGGAAATGACCCTGTGTTCATGGATGTCATGTCCATCTGA 1320 0.4477 MAGIRLISTSTIQATNHGDLTQKIDLTPWDLQLLKIEAIQQGLLFHKPKIEDTSNQIQHLKNSLSSTLNFFPPLAGRLIITEHEDNTVSSFIACNNVGALFVHAAAENTSVADILQPNYVPSIVHSFFPLNGVRNYEGTSQPLLAMQVTELVDGIFIGFAMNHVVADGKSFWQFINSWAEISRGFDKVIKLPTTFHRWFPDGVDLPIRIPFTKEEKQVYENYKQQLPPHRIFHFTKEKIAQLKSKANADVGTERISSLQALLTHIWRYVIRSQCLDPQRETSYKLLIDVRSRMCPPLPENYFGNAGMIGLVTMKAEELLEGGLGKGAWEMNKMISLQSDEKVKKRYESLLETPFLITPGTASRSDALLTNSSPRFNFYGNDFGWGKPVAVRNGVANKSSGKITAFGGAEEGSIDIEACLPYEILEAMGNDPVFMDVMSI* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04514 439 Gene3D - 212 429 IPR023213 -
Rops2g04514 439 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 434 - -
Rops2g04514 439 Pfam Transferase family 5 430 - -
Rops2g04514 439 Gene3D - 2 205 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04514 Rops-Chr2 82432334 82436721 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04514 43 393 Monolignol Biosynthesis Gene Families AT5G48930 29.032 9.21e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04514 - - gmx:100797643 569.696