Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04512 ATGGTTCCGCCATTGCCAGAGGATTATTTTGGAAATGCGATACTGTTTGGTCGTGTCACCATGAAAGCAGGGGAGCTACTAGAGGAGGGTGGGCTCGGCAAGGGTGCTTTGGAGATGAACAAGATGATTGGTTTTCACTCTGATGACAAGATAAAGAACCACTATGAGTCTTGGGTGAGAAACCCCAAGCTAATTTCGCGGGGTAGCGTGGCCACAAGTAATTCCTTGGTCACAAGCAATTCTCCAAGGTTCAATGTTTATGGTAATGATTTTGGTTGGGGAAAGCCTGTGGCTGTTCGAAGTGGCGGTGCAAATAAAAGAAATGGGAAGATTACAGTGTTTGCTGGGGCAGAACAAGGTAGTATCGACGTTGAAGTGTGCCTTCCTCGTGAGATTCTAGAGGCCATGGGAAATGACCATGAGTTCATGGATGCCATTTCCAACTAA 447 0.4653 MVPPLPEDYFGNAILFGRVTMKAGELLEEGGLGKGALEMNKMIGFHSDDKIKNHYESWVRNPKLISRGSVATSNSLVTSNSPRFNVYGNDFGWGKPVAVRSGGANKRNGKITVFAGAEQGSIDVEVCLPREILEAMGNDHEFMDAISN* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04512 148 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 143 - -
Rops2g04512 148 Pfam Transferase family 2 143 - -
Rops2g04512 148 Gene3D - 1 141 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04512 Rops-Chr2 82428647 82429271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04512 3 131 Monolignol Biosynthesis Gene Families AT5G48930 25.758 5.29e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04512 - - lja:Lj0g3v0277469.1 218.394