Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04503 ATGCATCATTTGAAACCACTCTTCCCTCTCTTCTTCTTCTTCTTCTTCTTCTTCCACTTCATACTGGCTTCTTCCGAGAATTCGATGATACCTTCAGACGCGGTGTCTTTATTGTCGTTCAAGCGCAAAGCAGACCAAGACGACAAGCTCCTCTACGCGTTGAACGAGCGATACGACTACTGTGAGTGGCAGGGTGTTAAGTGCGCACAAGGCAAGGTCGTACGATTCGTCGTTCAAGGCTTAGGCCTTCGAGGTACCTTCCCTCCAAACACCTTAACTCAGCTTGACCAGCTCCGAGTCATGAGCCTCCGTAACAACTCCTTATTCGGACCCATTCCCGATCTGTCCCCACTCATTAACCTCAAATCTCTCTTCCTTGACCACAATCACTTCTCTGGTTCTTTCCCTCCTTCTATTCTCTTCCTTCACCGTCTCCTTACTCTTTCTCTTTCTCATAACAACCTCACCGGTTCACTCCCGCTTCAGCTCAACCTCTTAGACCGGCTCATTTCACTCCGGCTAGACTCTAACTCCTTCACCGGTTCCCTTCCTCCACTGAACCAATCAACGCTTAGAGTCTTCAATGTTTCAGCTAATAACCTCACCGGTCCGGTTCCTGTTACGCCCACACTTGTTCGCTTCAAACCGACGTCGTTTTCGGGAAACCCCTTTCTCTGCGGGGAGATTATTCACCTGCAGTGTGACCCTCGTTCTAGATTCTTCGGTTCCTCAAACGCCACCGTTTCATCCTCTGCGCCGCTGGGGCAGAGCGAGGAATCGCAGGGGATTGTGGTGGTTCCTTCTCCGGAGGAGAAGAAGCATAAAAGAACAAGCTTGGTACTTGGGTTCACTGTTGGGGTTGTTCTTCTCGCTTCTTTCTCGCTTGTGGTGATTGCATTGGTGAGAAAACAAAGCAGGGAAAGGAAACCGGTGAGTTTGGACACTCCTCCTTCGCCTGCGGTAATGGAAGTGAGAAACGAGGTTGGAACGGAATCGAAGGTGAAGAAGATGGAAGAGGCGCATAAGAGTGGGAATCTTGTGTTCTGCTGCGGTGAGGTGCAGAGGTATACGCTGGAGCAGCTTATGAGGGCTTCGGCGGAGTTGTTGGGTAGGGGGAATGTGGGGACCACTTACAAGGCGGTGTTGGATTTGCAACTGATTTTGACGGTGAAGAGGTTGGATGCCGGAAAAACTGCGGTGACTAGTGAGGAAGTGTTTCAACGACATATGGAGATGGTGGGTAGGCTTCGGCATCCAAATTTGGTTCCTTTAAGGGCTTATTTTCAGGCTAAGGAAGAGAGGCTTGTTATCTATGATTATCAACCCAATGGGAGTCTTTTCAACCTCGTTCATGGTTCAAGATCAGCAAGGGCGAAGCCTCTGCATTGGACATCATGCTTAAAAATAGCCGAAGATGTAGCCCATGGACTTGCTTATATACATCAAGCTTCGTCTTTGGTTCATGGCAACCTAAAATCCTCTAATGTACTTCTTGGAGTGGACTTTGAAGCTTGTATTACAGACTATTGTTTGGCCTTCCTTGCAGACTCTTCGTTCACTGAAGATCCTGATTCTGCAGCCTATAAAGCACCAGAGGTTCGCAAGTCAAACCGCAAGGCCACTCCAAAGTCTGATGTGTATGCTTTTGGTGTGTTATTGTTGGAGCTTTTGACGGGTAAACATCCTTCCCAACATCCTTTCCTTGCACCAATGGATTTGCAAGATTGGGTTAGAGCAATGAGGGATGATGATGGTAGTGAAGACAACAGGCTAGAAATGCTCACAGAGGTTGCCAGTATTTGCAGTGCAACCTCGCCTGAGCAGAGGCCAACAATATGGCAAGTCCTCAAGATGATACAGGGAATAAAGGATAGTGTTACGATGGAGGACGCTACACTCAACAGACACTCATAG 1914 0.4833 MHHLKPLFPLFFFFFFFFHFILASSENSMIPSDAVSLLSFKRKADQDDKLLYALNERYDYCEWQGVKCAQGKVVRFVVQGLGLRGTFPPNTLTQLDQLRVMSLRNNSLFGPIPDLSPLINLKSLFLDHNHFSGSFPPSILFLHRLLTLSLSHNNLTGSLPLQLNLLDRLISLRLDSNSFTGSLPPLNQSTLRVFNVSANNLTGPVPVTPTLVRFKPTSFSGNPFLCGEIIHLQCDPRSRFFGSSNATVSSSAPLGQSEESQGIVVVPSPEEKKHKRTSLVLGFTVGVVLLASFSLVVIALVRKQSRERKPVSLDTPPSPAVMEVRNEVGTESKVKKMEEAHKSGNLVFCCGEVQRYTLEQLMRASAELLGRGNVGTTYKAVLDLQLILTVKRLDAGKTAVTSEEVFQRHMEMVGRLRHPNLVPLRAYFQAKEERLVIYDYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQASSLVHGNLKSSNVLLGVDFEACITDYCLAFLADSSFTEDPDSAAYKAPEVRKSNRKATPKSDVYAFGVLLLELLTGKHPSQHPFLAPMDLQDWVRAMRDDDGSEDNRLEMLTEVASICSATSPEQRPTIWQVLKMIQGIKDSVTMEDATLNRHS* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04503 637 FunFam Leucine-rich repeat receptor-like protein kinase 144 236 - -
Rops2g04503 637 FunFam Probable inactive receptor kinase At5g67200 32 142 - -
Rops2g04503 637 Gene3D Ribonuclease Inhibitor 31 187 IPR032675 -
Rops2g04503 637 SUPERFAMILY Protein kinase-like (PK-like) 367 624 IPR011009 -
Rops2g04503 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 625 IPR046959 -
Rops2g04503 637 Gene3D Ribonuclease Inhibitor 188 238 IPR032675 -
Rops2g04503 637 SUPERFAMILY L domain-like 31 227 - -
Rops2g04503 637 Gene3D Transferase(Phosphotransferase) domain 1 442 635 - -
Rops2g04503 637 Gene3D Phosphorylase Kinase; domain 1 327 440 - -
Rops2g04503 637 ProSiteProfiles Protein kinase domain profile. 363 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04503 637 Pfam Protein kinase domain 366 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04503 Rops-Chr2 82246095 82249023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04503 27 630 Receptor kinase-like Gene Family AT3G50230 55.309 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops2g04503 Pkinase 8.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04503 - - gmx:100783086 904.434