Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04490 ATGAGCCACCCAAGCCTTGGTCTCTGTTCATGGTGGAGAGTTGTTGCACTTGTGCTTCTTGTCACTGTCCACCAATGTTGTGGCCTGAGTAGGGACGGTGTTCTGTTACTTTCCTTCAAGTACAAGGTGCTGAGTGACCCTCTTTATGTGCTTGGAAACTGGAACTATTTCGATGAGACACCATGTTCATGGAACGGGGTTGCTTGTTCCTTCAGAGCAGAACCAGGTGCAACAAATGCTACCCAATATCGTGTGACTGGGTTGTCTCTACCAGATTCTCAGCTTCTGGGTTCCATTCCTTCCGATCTGGGTTCCATTGAGCATCTTCAAATTCTTGACCTTTCCAACAATTCCCTCAATGGGTCTCTTCCTTCTTCGCTTTTCCAAGCCTCCGAGCTAAGGTTTCTTAACTTGTCAAACAACTTGATAACAGGGGAGATTCCCGAGTCCATAGTACAGCTCAGAAATCTTCAGTTTCTTAACCTTTCAGACAATGCCTTGGCAGGAAAACTGCCCAACAATCTGTCAAACATGCAAAATCTAACCGTAGCTTCGCTGAAGAACAATTACTTGTCTGGTTTTCTTCCTAGTGGGTTGCGAACGTTGCAGGTTTTGGATCTCTCTTCCAACTTGTTGAACGGGACTCTGCCCCCAGATTTCGGTGGTGAAGTCATGCGTTACTTAAACATTTCATACAACAGATTTTCAGGGGAAATTCCACAGGAGTTTGCGGAGAAAATTCCGGGAAACGCCACCGTTGACCTCTCATTCAACAATCTCACAGGCCATATTCCAGATTCTGATGTCTTGCTGAATCAGCCAACAAAGTCATTCTCTGGAAACAACGCTGATCTGTGTGGAGAACCAACCAAGAATGCATGTCCTATTCCTTCTTCACCATCCTCTGAACCCGAAGTTTCTTCTCCCACATCTCCTCCTGCAATCGCTGCAATCCCAAAGACATTTGATTCTTCTCCCCAGTCGCCAGCTCAACGAAAACAGGGTGGCATCAGGGGAGGAACTATTATAGGAATCGTGGTGGGAGATGTTGTTGGCATTGGAATCTTAGCCATGATCTTCGTGTATGTGTATCGGTTGAAGAGAAAGAAGGACGCAGATAGTGCAATAAAGAATGAAGCAGCTATGGCAAGGAGCGAGGTTTCATCATCAAGCTCCGAGTCAAGAGGGTTCACGAGGTGGTCGTGTTTGCGCAAAAGAGCAGAAGAGGAAGAATCCTCAGGGACACCGAGCTCTTCGGACAGTGATGTGGAAGCAGCACAAGATGGTGTTGAAAATCAGAAGCAACAAGAGAACAAAACGGGTACTCTTGTGACCGTTGATGGTGAACGAGAGCTTGAGCTTGAAACACTCCTGAAGGCCTCAGCATATATACTGGGTGCCACTGGTTCAAGCATAATGTACAAGACTGTGCTTCAAGATGGCACTTCCTTAGCGGTTCGCAGAATCGGTGAGAGTGGCGTGGAGCGGTTCAAGGACTTCGACAACCAGGTTCGTGTCATTGCTAAACTGGTACACCCCAATCTGGTTCGGGTTCTTGGCTTCTATTGGGGACATGATGAGAAGCTCATCATCTATGACTTCGTTCCAAACGGATGCCTTGCCAATGTTCGTTACAGGAAGGTGGGCTCCTCGCCTTGTCACTTACCGTGGGAAGTCCGGCTCAAGATAGCGAAAGGGGTGGCACGTGGGCTGGCTTATCTCCACGAGAAGAAGCACGTGCATGGAAATTTGAAGCCTAGCAATATTCTATTGGGCAACGATATGGAGCCCAAGATTGGAGACTTTGGGCTTGAGAGAATAGTGACTGGTGATACTAGTTATAAAGCTGGAGGATCCGCACGTATTTTTGGGAGCAAGAGATCCACGGCCTCACGTGATAGCTTCCAAGACGTCACCTTTGGGCCTAGCCCGAGCCCGAGCCCGAGCTCGATAAGTGGTGTATCTCCTTACCATGCTCCGGAGTCGCTCAGGAACCTGAAGCCTCACCCAAAGTGGGATGTGTACTCTTTTGGGGTCATGTTTCTTGAATTGCTAACGGGGAAGATTGTAGTTTTGGATGACATGGGCCAAGGGCCTGGTGTTTTGATTGAGGATAAGAACCGGGCTTTTCGGATGGTTGATGTGGCTATTCGTGCTGACATGGAGGGTAAGGAGGAGGCCTTGTTGGCCTACTTCAAGTTAGGGTACAGTTGTGTGTCGAGTGTTCCTCAGAAAAGGCCATCAATGAAAGAGGTGCTACAAGTTCTTGAAAAGATCCCTACTTCATCGTCGTATTATTATGGCCACTAA 2310 0.4784 MSHPSLGLCSWWRVVALVLLVTVHQCCGLSRDGVLLLSFKYKVLSDPLYVLGNWNYFDETPCSWNGVACSFRAEPGATNATQYRVTGLSLPDSQLLGSIPSDLGSIEHLQILDLSNNSLNGSLPSSLFQASELRFLNLSNNLITGEIPESIVQLRNLQFLNLSDNALAGKLPNNLSNMQNLTVASLKNNYLSGFLPSGLRTLQVLDLSSNLLNGTLPPDFGGEVMRYLNISYNRFSGEIPQEFAEKIPGNATVDLSFNNLTGHIPDSDVLLNQPTKSFSGNNADLCGEPTKNACPIPSSPSSEPEVSSPTSPPAIAAIPKTFDSSPQSPAQRKQGGIRGGTIIGIVVGDVVGIGILAMIFVYVYRLKRKKDADSAIKNEAAMARSEVSSSSSESRGFTRWSCLRKRAEEEESSGTPSSSDSDVEAAQDGVENQKQQENKTGTLVTVDGERELELETLLKASAYILGATGSSIMYKTVLQDGTSLAVRRIGESGVERFKDFDNQVRVIAKLVHPNLVRVLGFYWGHDEKLIIYDFVPNGCLANVRYRKVGSSPCHLPWEVRLKIAKGVARGLAYLHEKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDVTFGPSPSPSPSSISGVSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDDMGQGPGVLIEDKNRAFRMVDVAIRADMEGKEEALLAYFKLGYSCVSSVPQKRPSMKEVLQVLEKIPTSSSYYYGH* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04490 769 Gene3D Ribonuclease Inhibitor 30 198 IPR032675 -
Rops2g04490 769 Pfam Protein kinase domain 465 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04490 769 SUPERFAMILY Protein kinase-like (PK-like) 464 760 IPR011009 -
Rops2g04490 769 ProSiteProfiles Protein kinase domain profile. 459 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04490 769 Pfam Leucine rich repeat 108 167 IPR001611 GO:0005515
Rops2g04490 769 MobiDBLite consensus disorder prediction 406 444 - -
Rops2g04490 769 PANTHER OS05G0588300 PROTEIN 181 761 - -
Rops2g04490 769 MobiDBLite consensus disorder prediction 633 656 - -
Rops2g04490 769 MobiDBLite consensus disorder prediction 414 443 - -
Rops2g04490 769 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Rops2g04490 769 ProSiteProfiles Leucine-rich repeat profile. 132 154 IPR001611 GO:0005515
Rops2g04490 769 FunFam Os07g0541700 protein 543 625 - -
Rops2g04490 769 MobiDBLite consensus disorder prediction 289 336 - -
Rops2g04490 769 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 29 194 - -
Rops2g04490 769 MobiDBLite consensus disorder prediction 633 657 - -
Rops2g04490 769 FunFam Leucine-rich repeat receptor-like protein kinase 201 296 - -
Rops2g04490 769 SMART LRR_typ_2 154 178 IPR003591 -
Rops2g04490 769 SMART LRR_typ_2 106 130 IPR003591 -
Rops2g04490 769 SMART LRR_typ_2 199 222 IPR003591 -
Rops2g04490 769 SUPERFAMILY L domain-like 32 282 - -
Rops2g04490 769 PRINTS Leucine-rich repeat signature 109 122 - -
Rops2g04490 769 PRINTS Leucine-rich repeat signature 199 212 - -
Rops2g04490 769 MobiDBLite consensus disorder prediction 294 309 - -
Rops2g04490 769 Gene3D Phosphorylase Kinase; domain 1 424 534 - -
Rops2g04490 769 Gene3D Transferase(Phosphotransferase) domain 1 536 766 - -
Rops2g04490 769 Gene3D Ribonuclease Inhibitor 199 296 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04490 Rops-Chr2 82075920 82079349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04490 15 769 Receptor kinase-like Gene Family AT4G37250 58.974 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops2g04490 Pkinase 5.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04490 - - gmx:100784503 1146.34