Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04485 ATGGAAGCAGTTTCATATTCAATCCCCACTACCAAATTCCAATCACTTCATATTTACTCCCGAGCTACAATAATTCGATCCTCCAAGCTTACTCTTCGGCCACCCCCAATTTCAATCAAACCTTTCTATTCTTCCAAATTCCTAGTTCTCCATCACCACAGACTTCGTTCTGTCGCTGAATCCACCAGTAACCATCACCACAATCACCGCGATCATGACCACGACCACGACCACCATCACCATCACCATCACCACGGCATCGATGTTGCTAATCTCACCGGACCTCAAAGAGCCATAATCGGATTCGCCAAGGCCACAAGATGGATGGACTTGGCTAATATCCTGAGGGAGCATTTGCATCTATGCTGCTTCTCCGCTGCTTTATTTGTGGCCGCAGCCATTTGCCCTCATACCTTGCCCAAACCCCTCATCAAACCCTTTCAAAACACTCTCATCGTCATCGCCTTTCCTTTGGTTGGGGTCTCTGCATCACTTGATGCTCTTCTTGAAATTAGTAGTGGAAAAGTGAACATCCATGTATTAATGGCAATGGCAGCCTTTGCATCAGTATTTATGGGGAACTCTTTGGAAGGAGGGTTGCTTCTAGCCATGTTTAATCTGGCGCATATAGCCGAAGAGTATTTCACCAGCCGTTCAATGGTCGATGTCAAAGAGTTGAAGGAGAATCATCCAGAATTTGCTCTTGTTCTTGATACGAATGATGATAAACTTCCTAATACATTTGACTTGGCATACAAAAGTGTTCCTGTGCATGATGTAGCTGTAGGATCATATATCCTTGTTGGTGCTGGTGAGTCTGTGCCTGTAGATTGCGAAGTTTTTCACGGCTGTGCCACAATTACCATTGAGCACTTGACAGGGGAAGTCAAACCTTTGGAGGCCAAAGTTGGAGATAGAATTCCTGGGGGTGCAAGGAACTTAGATGGGAGGATAATTGTGAAGGTAACAAAGACATGGAAGGAATCAACTCTCAGCAGAATTGTGCAATTGACTGAAGAAGCACAGTTAAATAAACCTAAACTTCAAAGATGGCTGGATGAATTTGGTGAACGTTACAGCAAAGTTGTTGTGGTGCTATCAATTGCTATTGCTGTTATTGGGCCACTTGTATTTAAGTGGCCATTCATTAGTACGCCAGCTTGTAGAGGTTCAGTTTACAGAGCCCTAGGGCTCATGGTGGCAGCATCACCGTGTGCCTTGGCTGTGGCCCCATTGGCATATGCTACAGCCGTCAGCTCCTGTGCAAGAAAGGGGATATTACTCAAAGGTGGACATGTTCTGGATGCTCTAGCTTCTTGTCATACTATTGCATTTGACAAAACAGGGACATTAACAACTGGTGGACTTGTATTCAAGGCAATGGAGCCCATTTATGGTCATCACCTTGGAAACAATGAATCTAACATTCCTCCCTGTTGCATTCCAACCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCAGCCATGGAGAAGGGCACTACTCACCCCATTGGAAGGGCTGTGGTTGACCATAGCGAAGGCAAAGATCTCCTGTCTGTTTCTGTTGAAAGTTTTGAGTACTTTCCTGGTAGAGGCCTTACTGCTACTTTAAACAGCATTGAGTCAGGAACTGGAGGTGCTAAACCAATCAAAGCATCACTTGGGTCTATAGATTTCATCACTTCATTTTGTCAATCTGAAGATGAATCAAAAAAGATCAAGGAAGCTGCTAATACATCTTCTTATGGAAGTGAATTTGTTCATGCTGCCCTTTCAGTTAATCAGAAGGTAACCTTGATTCACCTAGAGGATAGGCCTCGTCCTGGGGTTTTTAATGTTATTCAAGAATTGCAAGATGAAGCAAAGTTTCGTGTAATGATGTTGACCGGTGATCATGAGTCTAGTGCTAGGAGAGTTGCAAGTGCTGTGGGCATCAATGAGTTCTATTGCAACCTGAAGCCTGAAGATAAGCTGAAACATGTAAAGGATATTTCAAGAGATATGGGGGGAGGCTTAATCATGGTTGGTGAAGGTATCAATGATGCCCCAGCACTTGCTGCTGCAACTGTTGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCCATAGCTGTTGCAGATGTGTTGTTGCTTCGAGAAAATATTTCTGCAGTGCCATTTTGTATCGCCAAGTCTCGCCAAACTACATCACTGATTAAACAAAATGTTGCCCTGGCTTTGTCGTGCATTATCATGGCTTCTCTTCCGTCAGTTTTGGGATTTCTGCCATTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACACTGCTAGTTTGTCTCAATTCCATACGTGCTTTAAATGAACCATCTTGGTCCTGGAAGCAGGATATATCACATTTGGTTAGCAATGTTAAATCTAGACTCCTATCTCTCAGGACAAATATCACGGGCTCAAGCCGCATCACAGCGGCAAATTTGTGA 2457 0.4408 MEAVSYSIPTTKFQSLHIYSRATIIRSSKLTLRPPPISIKPFYSSKFLVLHHHRLRSVAESTSNHHHNHRDHDHDHDHHHHHHHHGIDVANLTGPQRAIIGFAKATRWMDLANILREHLHLCCFSAALFVAAAICPHTLPKPLIKPFQNTLIVIAFPLVGVSASLDALLEISSGKVNIHVLMAMAAFASVFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMVDVKELKENHPEFALVLDTNDDKLPNTFDLAYKSVPVHDVAVGSYILVGAGESVPVDCEVFHGCATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRIIVKVTKTWKESTLSRIVQLTEEAQLNKPKLQRWLDEFGERYSKVVVVLSIAIAVIGPLVFKWPFISTPACRGSVYRALGLMVAASPCALAVAPLAYATAVSSCARKGILLKGGHVLDALASCHTIAFDKTGTLTTGGLVFKAMEPIYGHHLGNNESNIPPCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLLSVSVESFEYFPGRGLTATLNSIESGTGGAKPIKASLGSIDFITSFCQSEDESKKIKEAANTSSYGSEFVHAALSVNQKVTLIHLEDRPRPGVFNVIQELQDEAKFRVMMLTGDHESSARRVASAVGINEFYCNLKPEDKLKHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSCIIMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRALNEPSWSWKQDISHLVSNVKSRLLSLRTNITGSSRITAANL* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04485 818 Pfam E1-E2 ATPase 252 424 - -
Rops2g04485 818 Gene3D - 216 342 - -
Rops2g04485 818 SFLD C1.7: P-type atpase like 426 727 - -
Rops2g04485 818 Pfam haloacid dehalogenase-like hydrolase 442 687 - -
Rops2g04485 818 PRINTS P-type cation-transporting ATPase superfamily signature 620 630 - -
Rops2g04485 818 PRINTS P-type cation-transporting ATPase superfamily signature 698 710 - -
Rops2g04485 818 PRINTS P-type cation-transporting ATPase superfamily signature 444 458 - -
Rops2g04485 818 PRINTS P-type cation-transporting ATPase superfamily signature 597 608 - -
Rops2g04485 818 PRINTS P-type cation-transporting ATPase superfamily signature 674 693 - -
Rops2g04485 818 SUPERFAMILY Calcium ATPase, transduction domain A 252 337 IPR008250 -
Rops2g04485 818 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 51 816 - -
Rops2g04485 818 CDD P-type_ATPase_HM 122 776 - -
Rops2g04485 818 NCBIfam HAD-IC family P-type ATPase 573 754 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g04485 818 NCBIfam HAD-IC family P-type ATPase 252 467 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g04485 818 ProSitePatterns E1-E2 ATPases phosphorylation site. 446 452 IPR018303 -
Rops2g04485 818 SUPERFAMILY Calcium ATPase, transmembrane domain M 180 759 IPR023298 -
Rops2g04485 818 Gene3D - 455 605 IPR023299 GO:0000166
Rops2g04485 818 SUPERFAMILY HAD-like 442 774 IPR036412 -
Rops2g04485 818 SFLD p-type atpase 426 727 IPR044492 -
Rops2g04485 818 NCBIfam heavy metal translocating P-type ATPase 178 776 IPR027256 GO:0006812|GO:0016020|GO:0019829
Rops2g04485 818 MobiDBLite consensus disorder prediction 59 87 - -
Rops2g04485 818 Gene3D - 437 725 IPR023214 -
Rops2g04485 818 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04485 Rops-Chr2 81988347 82002108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04485 95 799 Primary Pumps ATPases AT4G37270 77.163 0.0 1098
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04485 K01534 - gmx:100776309 1383.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04485 2 81988347 82002108 Rops2g04485 2 81988347 82002108 ECH