LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops2g04477	ATGAACAAAGAAAAGAAAAGAAAAGTCAAAGCTGACGACTTGACCACTGGTGAAGTCTTCTTCTTATCATCTGAGTCCAATGTTCATTCTCTGTCCCTAGTTTTCAGAGATGCAATAATAATCATAGCTGAAAATAAGCATCAAGCACCAATTTTTTCCCCTATGGCAACTAGTCTTCAGCTCCACAGAATTCAATACTCTCTGTTTTTACTTGCTTTTCTTCTTCAATTCTCATCACTGCAGTTCTCCTCACTCGGGTACACACTCCCAGATAAGTACTTCATCAATTGTGGATCAGATAGCAATGTTACAGAAAATAATCGAGTTTACATCGGGGAATCAAACCCCAGCTACCCCAGCTACCCTAAAACCGGTTTCGGAAACAGCATGAAAGAGAACAGTGAGTCATCATCAGTGCCTTCTCCCCTCTACAGAACAGCAAGGATTTTTGGAAGTCGATCTTGGTATGAGTTCAATACTGAGATAAATTCCACCTACCTGGTACGCCTCCATTTCTTTGCTTTCTCTTCTTCACAAACTAATCTTTCCTCGGCTAGGTTCAATGTTTCCGTTCCTGGGTTCTGGCTGTTGCCAAATTTCAATGCCAGAAACTCTTCTTTAGTAAATGAATTCTTCATGAATAGCACTCATGGAAGCTTCAAAATCACTTTCACACCTCTTGAATCATCATTTGCGTTTGTTAATGCTATAGAACTCTTCGTACTCCCCCTCAATTTGATCCCTCATGAGGTCGCGCGTTACACTTATGGCATTAATGGAGGCTCATTATCTACTCATAAAGGCGGTTTTGTCTCTCGGGCGTTGGAGACCAAATATAGGCTTAACGTTGGTGGCAAAAATATCACAAGGGACAACGATAACTTGTTGAGAAACTGGATTCCAGATGATAATTATCTCATTAATCCAGAAAGTGCGAATAATAGTTCCCCGTTCAACGGGGAAATTAAGCACTATGTAGGTGATGATTCTGATGGTCCAAATTCATCTGAATTTACTGCCCCAAATGAGGTCTACGGAACTGCTAAAGTGATTAATTATAGCTCTTCTGGTGTTAAAGACTTAAACATGACTTGGAGTCTTCCTGTGGAGAAGAATGTAGATCATCTCATTAGGCTTCACTTTTGTGACATTTTTAATAAACAGGGTGGTCTTACAAACTTCCGATTGTTCATTTATGACAGTTATGTTCCTCTGGAGATAAATGATGATGTAAATGTGGTTGACCAGTTGCCTGCTCCTTATTATTATGATTTTGTGGTTCAGTCTGATGACTCTGGAATCGTGAAGATCAGTGTCCAACTTAATGACTCTGCAAGTATTCCGATTGCATTTTTAAATGGGCTAGAAATAATGAAAGTGATTGAACCATCAGATTCTGTTCCCGTGGACCTGGACAATTCCAATAATAATAGTCTTCCCGTGGTGCTTGGTTCAGTTCTTGGAGGTTTTGTTCTGGTTTCTGTGGTGGTCCTAGTTGTTGGGTTTCTTTGGCGTCGAAAAATCAGGAAAAAAGGGCCTGTTGAACACTCAGATTGGTCTCCAATTCCTGTTACTGCAGGAGGAAGTTCTCACAGCAGATTGACTGAGGGAACCATTCAAGGCTCCCCACTTCACAACATAAATCTTGGGCTGAAAATTTCCTTGCTTGATCTTCAATTGGCAACCAAGAACTTCGATGCAAAGCAGATAATTGGCAAGGGTGGTTTTGGCAATGTCTATAAGGGGGTTCTCAAGAATGGCATCAAAGTGGCTGTGAAAAGAGGTGAGCCAGGGTCAGGTCAAGGCCTTCCAGAATTTCAGACAGAGATCATGGTTTTGTCCAAGATTCGTCACAGGCATTTAGTTTCCTTAATTGGGTATTGTGATGAAAGATATGAGATGATACTTGTTTATGAGTACATGGAAAAAGGGACACTGAGAGACCATTTGTACAATACAAAATATCCAAGCTTGTCTTGGAAGCCAAGGCTTGAAATTTGTATTGGAGCTGCCAGAGGTCTTCATTATCTTCACAAAGGAGCAGCTGGGGGAATCATTCACCGTGATGTAAAATCCACCAACATATTGCTTGATGAGAACCTTGTGGCTAAAGTTGCTGACTTTGGCCTTTCAAGGACTGGTCCTCTTGATCATCAACCATATGTCAGCACTGGTGTTAAAGGCACTTTTGGGTATCTTGATCCTGAATATTTCAGGTCACAACAGCTGACAGAAAAATCTGATGTCTATTCATTTGGGGTAGTTCTTCTGGAAGTGTTATGTGCAAGACCAGCCATTGACCCGTCACTTCCAAGGGAGCAGGTGAACTTGGCTGAGTGGGGAATGCTTTGCAAAAACAAGGGGATGCTCGAAGAGATCATTGATCCTTCCATCAAGGGCCAAATTGATCAAAACTCACTAAGAAAATTTAGTGACACTGTAGAGAAATGCTTACAAGAAGATGGTTCTGATAGGCCAACAATGGGAGATGTGTTGTGGGACTTGGAGTATGCGTTGCAGCTTCAGCGAGGTGCAATACATAGAGAGCCACATGAGGATAGTTCTAGCAGTGCTTCTGCGTCACTTCAATTGCCCAATATTCGGCGTCTTCCTTCACTCTCCACGCTAAGTGAAATGGATGACTTATCGATTGTGAAGGGTGATGAATCTGATAGTGCAGGGGATTCAGTTTTCTCTCAGTTGAAAATTGATGAAGCTAGATAG	2724	0.4156	MNKEKKRKVKADDLTTGEVFFLSSESNVHSLSLVFRDAIIIIAENKHQAPIFSPMATSLQLHRIQYSLFLLAFLLQFSSLQFSSLGYTLPDKYFINCGSDSNVTENNRVYIGESNPSYPSYPKTGFGNSMKENSESSSVPSPLYRTARIFGSRSWYEFNTEINSTYLVRLHFFAFSSSQTNLSSARFNVSVPGFWLLPNFNARNSSLVNEFFMNSTHGSFKITFTPLESSFAFVNAIELFVLPLNLIPHEVARYTYGINGGSLSTHKGGFVSRALETKYRLNVGGKNITRDNDNLLRNWIPDDNYLINPESANNSSPFNGEIKHYVGDDSDGPNSSEFTAPNEVYGTAKVINYSSSGVKDLNMTWSLPVEKNVDHLIRLHFCDIFNKQGGLTNFRLFIYDSYVPLEINDDVNVVDQLPAPYYYDFVVQSDDSGIVKISVQLNDSASIPIAFLNGLEIMKVIEPSDSVPVDLDNSNNNSLPVVLGSVLGGFVLVSVVVLVVGFLWRRKIRKKGPVEHSDWSPIPVTAGGSSHSRLTEGTIQGSPLHNINLGLKISLLDLQLATKNFDAKQIIGKGGFGNVYKGVLKNGIKVAVKRGEPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERYEMILVYEYMEKGTLRDHLYNTKYPSLSWKPRLEICIGAARGLHYLHKGAAGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPLDHQPYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPAIDPSLPREQVNLAEWGMLCKNKGMLEEIIDPSIKGQIDQNSLRKFSDTVEKCLQEDGSDRPTMGDVLWDLEYALQLQRGAIHREPHEDSSSSASASLQLPNIRRLPSLSTLSEMDDLSIVKGDESDSAGDSVFSQLKIDEAR*	908

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops2g04477	907	FunFam	receptor-like protein kinase FERONIA	530	640	-	-
	Rops2g04477	907	MobiDBLite	consensus disorder prediction	886	907	-	-
	Rops2g04477	907	Gene3D	Transferase(Phosphotransferase) domain 1	641	859	-	-
	Rops2g04477	907	ProSiteProfiles	Protein kinase domain profile.	565	838	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Rops2g04477	907	ProSitePatterns	Protein kinases ATP-binding region signature.	571	593	IPR017441	GO:0005524
	Rops2g04477	907	Pfam	Protein tyrosine and serine/threonine kinase	568	832	IPR001245	GO:0004672\|GO:0006468
	Rops2g04477	907	Pfam	Malectin-like domain	95	460	IPR024788	-
	Rops2g04477	907	FunFam	Receptor-like protein kinase FERONIA	641	856	-	-
	Rops2g04477	907	Gene3D	-	92	241	-	-
	Rops2g04477	907	Gene3D	-	274	461	-	-
	Rops2g04477	907	CDD	STKc_IRAK	571	836	-	-
	Rops2g04477	907	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	685	697	IPR008271	GO:0004672\|GO:0006468
	Rops2g04477	907	SMART	serkin_6	565	838	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Rops2g04477	907	SUPERFAMILY	Protein kinase-like (PK-like)	553	833	IPR011009	-
	Rops2g04477	907	PANTHER	OS07G0166700 PROTEIN	552	842	IPR045272	GO:0004714\|GO:0006468
	Rops2g04477	907	Gene3D	Phosphorylase Kinase; domain 1	530	640	-	-
	Rops2g04477	907	FunFam	Putative receptor-like protein kinase	273	461	-	-
	Rops2g04477	907	FunFam	Putative receptor-like protein kinase	92	243	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops2g04477	Rops-Chr2	81903153	81905876	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops2g04477	87	907	Receptor kinase-like Gene Family	AT2G23200	46.801	0.0	657

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Rops2g04477		Malectin_like	5.5e-30	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops2g04477	-		-	mtr:25493508	1059.67