Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04476 ATGACAAATATCTCTGAAGTTAGTGAGACAGAATTATGCTGCGTCTGCTTTGAGCAAGTGTGTGCGATTGAAGCCCAGGACCGTGGCCACCAAATGTGTGCACGATGCACACTAGCCCCGTGTTGTCGCAACAAGCCTAACCCTTCTACTTCTCATCCTACCCCACCAGTTTGTCCATTCTGCAGAAGCACAATAGCTAGATTGGTGGTTATCAAGTTAGAAAGTCATGATGGCATTGATCAAGATGGTGTTGATATCAGTGGTTCCAAACCAAGCAAGTCAAGGAACTTCCTAAACCTGAATGAGGAAGGTAGCAACAGTTTTAAGGGACTATCAAGTGTAAATGCGTTTGGAAAGATATTTGCTTCTGAAAATGAGTGGGTTATGCTCCTTGGAGGAACAGAGACATCAGCTACAACTTTAGAATGGGCAATGTCTGCTTTACTAAATCACCCAGAAGTGTTGAAGAAGGCAAGAGATGAATTAGATACTCACATAGGACAAGATCGCCTAGTAGAAGAGTCAGACATTTCAAAACTCCCCTACCTTCAAAACATCATCTCTGAGACATTTCGTTTGCACCCTGCATTCCCATTGTTGGCACCCCATTTTTCTTCAAAAGATTGCACCATAGGAGGATATAATGTCCCACAAGGCACTATTTTATTAGTTAATGCTTGGGCCATTCATAGAGATTCTCAGCTATGGAATGACCCCACACAATTTAAGCCTGAAAGATTTGAGAAAGAAGGGGAAGCAGATAAGTTAATTCCATTTGGGTTGGGAAGAAGGGCTTGTCCTGGAGCAGGCTTGGGGCAACGTACAGTAAGTTTAACTTTGAGCTTACTGATTCAATGTTTTGAGTGGAAACGTGTAAGTGAGGAAGAAATTGATATGACTGAAGGAAAAGGGGCAACCACGCCGAAGCTAATTCCTTTAGAGGCCATGTGTAAAGCACGTCCAAATATCATCAACAAGGTTTTTCAGAAAGCCAGTGAAAACATGTAA 1008 0.4246 MTNISEVSETELCCVCFEQVCAIEAQDRGHQMCARCTLAPCCRNKPNPSTSHPTPPVCPFCRSTIARLVVIKLESHDGIDQDGVDISGSKPSKSRNFLNLNEEGSNSFKGLSSVNAFGKIFASENEWVMLLGGTETSATTLEWAMSALLNHPEVLKKARDELDTHIGQDRLVEESDISKLPYLQNIISETFRLHPAFPLLAPHFSSKDCTIGGYNVPQGTILLVNAWAIHRDSQLWNDPTQFKPERFEKEGEADKLIPFGLGRRACPGAGLGQRTVSLTLSLLIQCFEWKRVSEEEIDMTEGKGATTPKLIPLEAMCKARPNIINKVFQKASENM* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04476 335 Gene3D Cytochrome P450 80 316 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04476 335 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 259 268 IPR017972 GO:0005506|GO:0016705
Rops2g04476 335 Pfam Cytochrome P450 128 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04476 335 SUPERFAMILY Cytochrome P450 124 320 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04476 335 PRINTS E-class P450 group I signature 266 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04476 335 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04476 335 PRINTS E-class P450 group I signature 256 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04476 335 PRINTS E-class P450 group I signature 225 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04476 335 PRINTS E-class P450 group I signature 141 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04476 335 PRINTS P450 superfamily signature 185 196 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04476 335 PRINTS P450 superfamily signature 266 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04476 335 PRINTS P450 superfamily signature 132 149 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04476 335 PRINTS P450 superfamily signature 257 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04476 335 PANTHER CYTOCHROME P450 82C3-RELATED 127 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04476 Rops-Chr2 81877263 81887976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04476 129 332 Cytochrome P450 AT4G37360 68.137 5.32e-102 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04476 K13260 - lja:Lj0g3v0281229.1 388.267