Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04460 ATGGCTGCGCTTGGGATTGGAGAATTTCTTGTGGCGCTTCTTCATTTTGTTTTAATCCACTATTGGAGGCTCAACAGACACACACCCATCACCAAGTGGCCTGTGCTTGGAATGCTGCCCGGTCAAGGAGGTACTTTCATGTTTGAAGGACCTTGGCTAACAAACATGAACATTGTTTTTACCTGCAACCCGATGAACGTGCAACACATCACAAACACAAAGTTCGAAAACTATGGCAAAGGGAATGATTTTAGAGAGATTTTTGAGGTTCTGGGAGAAGGGATTTTCAGGTCTGATTCCAACACATGGAAGTACAATAGAACTTTACTTCATTCAATTTTCAAGCAGGCAAGTTTTCAATCGTTTAATCACAAAACGATAGAGAGAAAGGTGGATAGTTGTCTACTTCCGTTTCTTGATCATGCATGCAAAGGAGAAGTGCAGGTGGACTTGCAAGATGCTTTTCAAAGGTTAACTTTCGACATCATCTGCTACGTTGTTTTAGGATTTGATCCTAATTGCCTTTCCATTGAATTCCCCGAAGTTGCATGTGAGAAAGCGTTCAATGAAGCAGAGGATACACTGTTCCACAGACATGTCAGGCCAAGTTGCTTATGGAAGCTGCAGAAATGGCTCCAAGTTGGAAAAGAGAAGAAGTTCAAAAAAAACCAGAAAGCTATTGACCAAATGTTGTATGCAGAAATCACATCCAAACGTAAAATGCAAGGCCAAAGCAGCAGCAATAGCACTCTGGCTGATGAGTCACAATTTGACATGCTAAATGCCCTTATAAATGAAGTAGGAAAGGAACAAATAGATGACAAGTTTCTGAGAGACACAGCAATAAATCTCCTCGCAGCTGGGAGAGACACCATTAGTGCAAGCCTCACTTGGTTTTTCTGGCTGGTCGCAACACACCCATCTGTTGAAGCTAAGATTCTTGAAGAGATCCGAGAAAAATTACCAAAAAGAGAAAAAGGTAATTGGAAGGATTTAGGTATGGAAGGGCTTAGCAGGTTAGTTTATCTCCATGGAGCTATATGTGAAACCTTAAGGCTTTATCCTCCAGTACCTTTTGAGCACAAGTGTGAATTAAAATCTGATATGCTTCCTAGTGGTCATTGCGTTAAGTCAAATACCATGATAGTATATTCTTTATACTCAGTGGGAAGGGTGGTGGAACTGTGGGGAGAAGATTGCTTAAAATTTAGACCAGAGAGGTGGATTTCTGAAAGAGGAGGGATCATTCACGTACCCTCTTACAAGTTCATTGCTTTCAATGCAGGACCGAGAACTTGTTTGGGTAAGGACATAAGCTTCACTCAGATAAAGATGATTGCTGCTGCTATATTGTGGAATTATCATATCCACGTGGTGGAAGGCCACCCTGTCTCCCCAAGTGTTTCCGTTGTCCTTCACATGAAACATGGCTTGAAGGTTATGGTGACAAAAAGAAGCATTTGA 1464 0.4153 MAALGIGEFLVALLHFVLIHYWRLNRHTPITKWPVLGMLPGQGGTFMFEGPWLTNMNIVFTCNPMNVQHITNTKFENYGKGNDFREIFEVLGEGIFRSDSNTWKYNRTLLHSIFKQASFQSFNHKTIERKVDSCLLPFLDHACKGEVQVDLQDAFQRLTFDIICYVVLGFDPNCLSIEFPEVACEKAFNEAEDTLFHRHVRPSCLWKLQKWLQVGKEKKFKKNQKAIDQMLYAEITSKRKMQGQSSSNSTLADESQFDMLNALINEVGKEQIDDKFLRDTAINLLAAGRDTISASLTWFFWLVATHPSVEAKILEEIREKLPKREKGNWKDLGMEGLSRLVYLHGAICETLRLYPPVPFEHKCELKSDMLPSGHCVKSNTMIVYSLYSVGRVVELWGEDCLKFRPERWISERGGIIHVPSYKFIAFNAGPRTCLGKDISFTQIKMIAAAILWNYHIHVVEGHPVSPSVSVVLHMKHGLKVMVTKRSI* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04460 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Rops2g04460 487 SUPERFAMILY Cytochrome P450 19 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04460 487 Gene3D Cytochrome P450 16 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04460 487 CDD CYP86A 46 478 - -
Rops2g04460 487 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04460 487 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04460 487 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04460 487 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04460 487 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04460 487 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04460 487 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04460 487 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04460 487 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04460 487 Pfam Cytochrome P450 52 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04460 487 PANTHER CYTOCHROME P450 31 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04460 Rops-Chr2 81568600 81570063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04460 1 486 Cytochrome P450 AT2G23180 43.907 4.82e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04460 - - gmx:100785815 756.518