Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04445 ATGACGCAATTCACACCACCGTTACCTCCTTTGCACCAAATCACACCCTTTTCCAACCCTTCCATGAACAAAAATCAAATTCCTAGGACTAGGCCATGGCCTGTAGGGTTTCCCACATCCAAGGCCCTAAGCAACTTTGATGATGCCAACTGCATGGAACAGTTACTTGTTCACTGTGCCAACGCCATAGAAAGCAACGATGTAACTCTGGCACAACAGATCATTTGGGTCCTCAACAACATAGCACCCCCAGATGGTGATTCCAATCAACGTTTAGCCTATAGCTTCCTTCGAGCCCTAACAACTCGACCTGCCAAAACTGGAAGTTGCAAGATGCTGGAAGCAGTGGCTGACCCTTGTAACAACCTCTTCACCATAGACACTCACAAATTCTCAGTTATCGAGCTAGCCAACTTCGTTGACTCGACCCCTTGGCATCGCTTTGGTTTCACAGCTGCTAATGCAGCCATTCTTGAAGCTACAGAAGGATTCTCAGTCATCCACATCGTGGACTTAAGTTTGACACATTGCATGCAGATTCCTACACTAATTGATGCTATAGCTAGACGCTATGATGTGCCTCCTTTGATCAAGCTCACAGTAGCCGGTGCAACCAGAGAAATCCCACCTAAGCTTGATCTTTCTTGTGATGAACTTGGTGCTAAGTTAGTCAATTTCGCTAGGTCAAGGAATGTGATAATGGAATTTAGAGTGGTTTCTTCTAGTTTCACAGATGGGTTTGCTACTTTGATTGAACACTTGAGAGTGCAACGTTTAGTTTATGCAACGGAAGCTTTGGTTGTAAACTGTCACATGATGCTTCATTATATCCCTGATGAAACCCTATCTGCAATTCCTGACACAGACTCAACCTCTTATGTTTATGATTATTCTTGTGCTGCTTCTGTTGTTACTTCAACAACGTCCCTGAGAACATTGTTCCTTAAAGCCCTTAGGGGTTTAGACCCAACCATTGTCCTTTTGGTAGATGAAGATGTAGATTTAACATCCAATAACTTGGTGTGTAGACTAAGGTCTGCGTTTAATTATCTATGGATACCTTATGATACTGTGGACACATTCCTCCCACGAGGGAGTAAACAAAGGCAGTGGTATGAGGCAGACATTTGTTGGAAGATTGAGAATGTGATAGCACATGAAGGGACTCAGAGGGTTGAGAGGCTTGAGCCTAAAAGCAAGTGGGAGCAGCGAATGAGAAATGCAAACTTCCATGGAATCACTTTCAGTGAGGACTCTGTTGCAGAGGTGAAGGCAATGCTTGATGAACATGCTGCTGGATGGGGATTAAAGAAGGAAGAGGAACATATTGTGCTCACATGGAAAGGGCACAATGTTGTCTTTGCCTCTGCTTGGTTGCCTGCTTGA 1386 0.4423 MTQFTPPLPPLHQITPFSNPSMNKNQIPRTRPWPVGFPTSKALSNFDDANCMEQLLVHCANAIESNDVTLAQQIIWVLNNIAPPDGDSNQRLAYSFLRALTTRPAKTGSCKMLEAVADPCNNLFTIDTHKFSVIELANFVDSTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIARRYDVPPLIKLTVAGATREIPPKLDLSCDELGAKLVNFARSRNVIMEFRVVSSSFTDGFATLIEHLRVQRLVYATEALVVNCHMMLHYIPDETLSAIPDTDSTSYVYDYSCAASVVTSTTSLRTLFLKALRGLDPTIVLLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGTQRVERLEPKSKWEQRMRNANFHGITFSEDSVAEVKAMLDEHAAGWGLKKEEEHIVLTWKGHNVVFASAWLPA* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04445 461 MobiDBLite consensus disorder prediction 1 31 - -
Rops2g04445 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 51 448 IPR005202 -
Rops2g04445 461 Pfam GRAS domain family 52 458 IPR005202 -
Rops2g04445 461 ProSiteProfiles GRAS family profile. 43 459 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04445 Rops-Chr2 81372682 81374067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04445 34 460 GRAS Transcription Factor Family AT3G49950 57.773 8.67e-174 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops2g04445 GRAS 5.1e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04445 - - jre:108988551 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04445 2 81372682 81374067 Rops2g04445 2 81372682 81374067 ECH