Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04440 ATGGCCATAAGGCCCTTCCAATTCAACTTCTCGCGCGATAGATTGGTCTTTCTCTTCCGCACTGCTCAATCTCATTCATTTCCCTCTTTTCTCCGCTCTTGTAAATTCCCTCAAACCATTCTCTCCTCTTTCTCCTTTCGCCACTTCGCCGCTTCCGCCCCAGCTCCGCCTTTGTCACACCACCTCCGCCTCCGTTCACCACCTCCTCCTCCGCCGCCTGACACCATGGCTCAGAAGATTGGAAAATCCACGCGCCGCCCTGGCGCTTCCTCCAAGGCGAGGGTTTATGCCGACGTCAACGTTGTTCGCCCCAAAGAATATTGGGACTACGAATCCCTCACCGTCCAGTGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAGGTGGGTAGGGGGAAATACAGTGAGGTGTTTGAAGGCGTGCACTGTACTGATAATGAAAAATGTGTCATCAAGATCCTCAAACCTGTGAAGAAGAAGAAGATCAAGAGGGAAATCAAAATATTACAGAATCTTTGTGGAGGGCCCAATATTGTAAAGTTGCTTGACATTGTCAGAGACCAGCAGTCGAAAACCCCAAGTCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTGCTTTATCCTACATTGTCAGACTATGATATACGATATTATATCTATGAACTTCTAAAGGCGCTTGATTATTGCCATTCACAAGGAATCATGCATCGGGATGTAAAGCCCCATAATGTAATGATTGACCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGTCTTGCAGAGTTCTATCATCCTGGGAAAGAATATAATGTTCGTGTGGCTTCAAGATATTTCAAAGGTCCTGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTATGGAGCCTTGGCTGTATGTTTGCCGGGATGATATTCCGTAAGGAGCCATTCTTTTATGGACATGATAACTATGATCAACTGGTCAAAATAGCTAAGGTACTTGGGACGGATGAATTAAATGCATATTTGAATAAGTATCGAATAGAGTTGGACCCGCATCTTGCTTCGCTTGTTGGAAGGCATAGCCCGAAGCCTTGGGCAAAGTTCATTAATGTGGAAAATCAACACTTGGCTGTTCCTGAGGCTGTTGACTTTGTTGACAAGTTACTTCGATATGATCACCTAGAACGTCCCACTGCAAAAGAAGCAATGGCCCATCCATACTTCAATCCAGTTAGAAATGCAGAAAGTAGTAGAACTCGTACACATTGA 1269 0.4452 MAIRPFQFNFSRDRLVFLFRTAQSHSFPSFLRSCKFPQTILSSFSFRHFAASAPAPPLSHHLRLRSPPPPPPPDTMAQKIGKSTRRPGASSKARVYADVNVVRPKEYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNKYRIELDPHLASLVGRHSPKPWAKFINVENQHLAVPEAVDFVDKLLRYDHLERPTAKEAMAHPYFNPVRNAESSRTRTH* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04440 422 PANTHER CASEIN KINASE II SUBUNIT ALPHA 85 418 IPR045216 GO:0004674|GO:0006468
Rops2g04440 422 Gene3D Phosphorylase Kinase; domain 1 123 199 - -
Rops2g04440 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Rops2g04440 422 MobiDBLite consensus disorder prediction 61 76 - -
Rops2g04440 422 SMART serkin_6 123 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04440 422 SUPERFAMILY Protein kinase-like (PK-like) 94 412 IPR011009 -
Rops2g04440 422 FunFam Casein kinase II subunit alpha 200 411 - -
Rops2g04440 422 ProSiteProfiles Protein kinase domain profile. 123 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04440 422 ProSitePatterns Protein kinases ATP-binding region signature. 129 152 IPR017441 GO:0005524
Rops2g04440 422 MobiDBLite consensus disorder prediction 56 91 - -
Rops2g04440 422 CDD STKc_CK2_alpha 104 408 IPR045216 GO:0004674|GO:0006468
Rops2g04440 422 Pfam Protein kinase domain 123 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04440 422 FunFam Casein kinase II subunit alpha 109 199 - -
Rops2g04440 422 Gene3D Transferase(Phosphotransferase) domain 1 200 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04440 Rops-Chr2 81220097 81230246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04440 121 408 Core Cell Cycle Gene Families AT3G48750 32.890 5.45e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Rops2g04440 Pkinase 4.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04440 K03097 - gmx:100776388 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04440 2 81220097 81230246 Rops2g04440 2 81220097 81230246 ECH