Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04439 ATGGGAGAAGAGCGTGCTGCGGTGGTCGTGACTGTGAGAGAGTTCGACCCAAATAAAGACAGAGAGAGAGTGGAAGCCGTTGAAATAATATGTGAGGTTGGACCCAGTGGGAAGCTTTCCCTCTTCACCGACTTGCACGGTGACCCAATTTGCAGGGTCCGCAACTCACCAACTTTCCTCATGCTGGTCGCTGAGATAGGTGAAGAGACAGTGGGAATGATAAGAGGTTGCATCAAAACAGTTACATGCGGGAAAAAGCTCCACAGACACGGAAAGAACACCAGCACCCACTTAATGATTGACAACAACAACAACAACACCGAAACCGTCCAAGCCAGTTGCAAACAAGTCCCTGTTTACACCAAACTCGCCTACATACTAGGCCTTCGTGTTTCCCCATATCACAGGAGAATGGGAATAGGGTTGAAACTGGTGCAAAGGATGGAAGAATGGTTCAGAGAAAATGGAGCTGAATATGCGTACATGGCTACGGAAAAGGATAACGTAGCATCGGTTAACCTCTTCACCGACAAATGCGGGTATTCAAAGTTCCGTACCCCATCCATCCTCGTGAACCCCGTTTTTGCTCACCGAGTCAGGACCTCACACAAGGTCACTATAATCCAACTCACTCCAAACGACGCCGAATCACTCTACCGTAACCGATTCGCCACTACTGAGTTCTTCCCTCGTGACATTGACTCCATCCTCAACAACAAACTCAGCCTCGGCACCTTCCTCGCCGTCCCACGCGACTCATACCGGCCAGACAAGTGGCCGGGCTTGGACCGTTTTCTGTCGGACCCACCACGGTCCTGGGCCGTAGTAAGCGTTTGGAACTGCAAGGAGGTGTTCACACTCGAGGTGAGAGGCGCGTCGCGCGTGAAGCGGGCCTTGTGCAAGACGACCCGGGTTTTGGACCGGGCCTTACCCTGGCTCCGATTGCCTTCCATCCCAAACTTCTTCAAACCATTCGGGTTTCACTTTATGTACGGGCTTGGAGGGGAGGGCCCAGAGGCTTTGAAGATGGTTAGGGCTCTATGTGGGTTCGCCCATAACTTGGCGAAGGACCATGGGTGCGGTGCGGTGGCCACGGAGGTATCGAGCCGTGAACCGTTACGGTTGGCTATCCCACACTGGAAGATGCTGTCTTGTGAAGAGGATTTGTGGTGTATCAAGAGGCTTGGGGAAGATTACAGTGATGGGTCCGTTGGTGACTGGACCAAATCTCCTCCTGGATTCTCAATTTTTGTTGACCCCAGGGAGTTGTAA 1272 0.522 MGEERAAVVVTVREFDPNKDRERVEAVEIICEVGPSGKLSLFTDLHGDPICRVRNSPTFLMLVAEIGEETVGMIRGCIKTVTCGKKLHRHGKNTSTHLMIDNNNNNTETVQASCKQVPVYTKLAYILGLRVSPYHRRMGIGLKLVQRMEEWFRENGAEYAYMATEKDNVASVNLFTDKCGYSKFRTPSILVNPVFAHRVRTSHKVTIIQLTPNDAESLYRNRFATTEFFPRDIDSILNNKLSLGTFLAVPRDSYRPDKWPGLDRFLSDPPRSWAVVSVWNCKEVFTLEVRGASRVKRALCKTTRVLDRALPWLRLPSIPNFFKPFGFHFMYGLGGEGPEALKMVRALCGFAHNLAKDHGCGAVATEVSSREPLRLAIPHWKMLSCEEDLWCIKRLGEDYSDGSVGDWTKSPPGFSIFVDPREL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04439 423 Gene3D - 48 187 - -
Rops2g04439 423 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 10 200 IPR000182 GO:0016747
Rops2g04439 423 FunFam Probable N-acetyltransferase HLS1-like 19 188 - -
Rops2g04439 423 Pfam Acetyltransferase (GNAT) family 56 181 IPR000182 GO:0016747
Rops2g04439 423 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 423 - -
Rops2g04439 423 CDD NAT_SF 112 161 - -
Rops2g04439 423 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 48 183 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04439 Rops-Chr2 81172896 81174680 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops2g04439 Acetyltransf_1 1.8e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04439 - - gmx:100804109 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04439 2 81172896 81174680 Rops2g04439 2 81172896 81174680 ECH
Rops1g01870 1 38260668 38262242 Rops2g04439 2 81172896 81174680 PCT