Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04437 ATGAAAGTCCATCATTTGAGTTTCTTTTTGATCCTATCATTGTTTCTATTGACCCCAGTCCCCACTGCAAAGGGGGTTAATAATGCAATTCAATTCCGCATTTCCAATGAATCCCACACAAGAAGGGTCCTACACCAACCGTTGTTTCCGACGGATTCTTCTCCGCCTCCGCCTCCGCCGCCGTCGGCTCCGGCAGATCCTTCGTCTCCCGACATTCCCTTCTTCAACGAGTATCCGGCAGGGCCACAGCCGTACCCGGAGCAGAACCAGAACCAGCCGCCACCGTCAGCCTCCAACGGCACAATTGCGAACCCGACGGCGACGAAACCAACGAAGCCGAAGAAGAATGTGGCAATTGCGGTCTCCGTGGGAATGGTGACGGTGGGGATGCTCTCCGCGCTGGGATTCTTCTTGTACAAGCATCGGTACAAACACCCTGCGGAGACTCAGAAGCTCTTCGTTGGTGGGAATTCTCGGAGAGTTCTGGAAGTTTCTCCGAGGGCCCCACCAACTTCCAACTTCCTCTACATTGGGACGGTGGAACCCACCAGAACGTCGGTGAGCGAACCTAACCACTTCCCTCATCACAAGCTCAATTCCATTGAACATCGTTACCGGCCTAGCCCCGAGTTGAAGCCATTGCCGCGGCTGAGAAATCCCGCAGACGTGATGCGCTCGCCGCCGGTGGCCTCCTCTTCCTCCTCCGACGAGGAAAGTCACGAGACAGCGTTTCATTCGCCGCAAGGGTCGTCGCTCAGCCACGAAGATAGCTATCACAAGCCGGTTTCCCGTTACAGTTACCTTGCTAACGGAAGCCCCGCCGCAGCTCCGGTGGTTCCTTTATCGAAGAGAACTTCGCCGAAATCTCGTTTTTCTGCTTCGGCGCCGGATATCAGACACGTCATCATACCATCCATAAAACATCATGCTCCTCCGCTGTCAACCCAATATCCGCACGTGGAAAAAGATTTGACATTCGGTCCTTCTAGAAGGCCGAAATTCTCACCATCTCCACCAGCACCGAATTTGACGCATCTTTGTTCAAACGTGTCCAGGACTTCACTTAATCCACCTCCACCTCCTCCTCCGCCGCCGCCTCCGCGGCGAAAGAGTTTGTCTCCTGCGATTAGCGTATCCTCGTCCTCTGAGTCAAAAAAGCAACAGCAACAGTCTCTGTCTCCGAGTCAAGCAGCGGTTTCTGCCAACAGTATGAGCAAAGCTTCAGAGGAAGGTGATGATGACGTGGATGGAACGAAACCCAAGTTGAAGGCTTTGCATTGGGATAAAGTGCGTGCTACCTCAGATCGTGCCACTGTGTGGGACCAGTTAAAATCAAGCTCCTTTCAGTTAAATGAGGACATGATGGAGACCCTGTTTGGCTGCAATTCAACAAATTCTGCACCTAAAGAGACAACTGTTATTCGAAAACCAGTTCTTCCACCTGTTGATCGGGACAATAGGGTGTTAGACCCCAAAAAGTCCCAAAACATAGCTATACTGCTCAGGGCACTGAATGTGACAAGAGATGAGGTGTCTGAAGCTCTGTTAGATGGGAATCCTGAGAGTTTGGGTGCTGAGCTATTGGAAACTTTAGTAAAGATGGCTCCAACAAAGGAGGAAGAGATAAAACTTAAAAATTATGATGGTGACCTCTCAAAACTTGGGTCTGCAGAAAGATTTCTTAAAGCAGTCCTTGATATCCCTTTAGCTTTTAAAAGAGTTGAAGCCATGCTATACAGAGCTAATTTTGAAACAGAAGTTAACTACCTTGGGAAATCCTTTCAAACCCTGGAGGCAGCTAGTGAGGAATTAAAGAACAGCCGGTTATTCCTCAAACTCCTTGAAGCTGTTCTCAAGACAGGAAACAGAATGAATGTTGGCACCAATCGCGGCGATGCTAAATCTTTCAAACTGGACACACTCCTGAAACTTGTTGATATAAAGGGAACAGATGGGAAGACCACATTGCTCCACTTTGTGGTCCAGGAGATCATTAAATCTGAAGGTACAGGTGGTGAATCAGCAAATGAGAATGTTCAAAACCAAACGAATTCTCAATTCAATGAGGATGAGTTCAGAAAGAAAGGACTGCATGTTGTGGCTGGACTGAGTAGAGACCTTGGTAATGTTAAAAAGGCAGCAGGAATGGACTCGGATGTCTTAAGCAGCTATGTCTCAAAGCTTGAAATGGGGCTTGATAAAGTGAGATTGGTTTTGCAATATGAAAAGCCAGATATGCAAGGGAACTTCTTTAATTCAACAAAGCTATTTCTGAAAGATGCTGAGGAGGAAATTGTTAGGATGAAGGCTGATGAGAGAAGGGCTTTATTCCTTGTGAAAGAAGTTACAGCATACTTTCATGGGGATACGGCAAAGGAAGAAGCGCACCCTTTCAGAATTTTTATGATAGTAAGAGATTTTCTAAATATTTTAGATCAAGTATGTAAAGAAGTGGGAAGGATGCAGGATAGAACTGTGATTGGTTCAACCAGATCCTTCAGGATAGCCGCAAGTGCTTCATTGCCTGTTCTCAACAGGTACCATGCAAGACAAGAAATAAGTTCAGATGAGGAAAGCTTATCCCCCTAG 2589 0.4755 MKVHHLSFFLILSLFLLTPVPTAKGVNNAIQFRISNESHTRRVLHQPLFPTDSSPPPPPPPSAPADPSSPDIPFFNEYPAGPQPYPEQNQNQPPPSASNGTIANPTATKPTKPKKNVAIAVSVGMVTVGMLSALGFFLYKHRYKHPAETQKLFVGGNSRRVLEVSPRAPPTSNFLYIGTVEPTRTSVSEPNHFPHHKLNSIEHRYRPSPELKPLPRLRNPADVMRSPPVASSSSSDEESHETAFHSPQGSSLSHEDSYHKPVSRYSYLANGSPAAAPVVPLSKRTSPKSRFSASAPDIRHVIIPSIKHHAPPLSTQYPHVEKDLTFGPSRRPKFSPSPPAPNLTHLCSNVSRTSLNPPPPPPPPPPPRRKSLSPAISVSSSSESKKQQQQSLSPSQAAVSANSMSKASEEGDDDVDGTKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSTNSAPKETTVIRKPVLPPVDRDNRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPESLGAELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKAVLDIPLAFKRVEAMLYRANFETEVNYLGKSFQTLEAASEELKNSRLFLKLLEAVLKTGNRMNVGTNRGDAKSFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIKSEGTGGESANENVQNQTNSQFNEDEFRKKGLHVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLEMGLDKVRLVLQYEKPDMQGNFFNSTKLFLKDAEEEIVRMKADERRALFLVKEVTAYFHGDTAKEEAHPFRIFMIVRDFLNILDQVCKEVGRMQDRTVIGSTRSFRIAASASLPVLNRYHARQEISSDEESLSP* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04437 862 Pfam Formin Homology 2 Domain 415 811 IPR015425 -
Rops2g04437 862 PANTHER FORMIN-RELATED 8 857 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Rops2g04437 862 SMART it6_source 412 826 IPR015425 -
Rops2g04437 862 MobiDBLite consensus disorder prediction 309 420 - -
Rops2g04437 862 Gene3D Formin, FH2 domain 412 823 IPR042201 -
Rops2g04437 862 MobiDBLite consensus disorder prediction 185 258 - -
Rops2g04437 862 MobiDBLite consensus disorder prediction 354 371 - -
Rops2g04437 862 MobiDBLite consensus disorder prediction 50 68 - -
Rops2g04437 862 MobiDBLite consensus disorder prediction 373 406 - -
Rops2g04437 862 MobiDBLite consensus disorder prediction 195 211 - -
Rops2g04437 862 MobiDBLite consensus disorder prediction 46 113 - -
Rops2g04437 862 ProSiteProfiles Formin homology-2 (FH2) domain profile. 412 837 IPR015425 -
Rops2g04437 862 SUPERFAMILY Formin homology 2 domain (FH2 domain) 357 823 - -
Rops2g04437 862 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04437 Rops-Chr2 81099896 81104785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04437 368 852 FH2 protein (formin) Gene Family AT5G67470 70.468 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04437 - - gmx:100803578 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04437 2 81099896 81104785 Rops2g04437 2 81099896 81104785 ECH
Rops1g01874 1 38368040 38372888 Rops2g04437 2 81099896 81104785 PCT