Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04434 ATGGACTCATCAAAGGCCATACCGCGTTCGTTCTCTCCCCAAACCTCATTCAGGTTCCGATCCACTACTTCGCGCTCCTCTCTATCGGTGTGGTCATCTCCCCCGCAAACCCAACCTACACGCGCTCTGAGATTTCGCATCTCCTCAACCTTTGCCAACCTGTCATCGCTTATCAGACGTCATTTTCAGCACACAATCTCCCACGCCTCCCTCTCGGAACGATTCTCCTCGACTCGCTCGAGTTCGACCGCGTCGCCGGACTTGAAGGTGAGTCAATCCCACGTGGCAGTGGTTCTGTACTCTTCTGGAACCACCGGGAAGTCAAAAGGTGTGATGCTCACTCACCGGAACTTGACAGCTTCGGTGGCGGCACACGACGCCATTCGCGTGCAGACGGAGAGTCCCGCGGTTTACCTTCATACGATTTCGTATTTTCATGTGTACGGTTTTGCGCAATGCTTGAAGTTAGTGGCTATGATGGAGACGTTTGGTTTGGGGAAGATGCTGGGTGCGGTGGAGATGTTCCGATTGACTCATGTTGTGGTGTTGCCGCCGGTTGTGGTGGCGATGAGGGAGGAGTGGTGA 585 0.5436 MDSSKAIPRSFSPQTSFRFRSTTSRSSLSVWSSPPQTQPTRALRFRISSTFANLSSLIRRHFQHTISHASLSERFSSTRSSSTASPDLKVSQSHVAVVLYSSGTTGKSKGVMLTHRNLTASVAAHDAIRVQTESPAVYLHTISYFHVYGFAQCLKLVAMMETFGLGKMLGAVEMFRLTHVVVLPPVVVAMREEW* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04434 194 Gene3D - 75 114 - -
Rops2g04434 194 Gene3D - 115 191 - -
Rops2g04434 194 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 74 191 - -
Rops2g04434 194 Pfam AMP-binding enzyme 84 190 IPR000873 -
Rops2g04434 194 SUPERFAMILY Acetyl-CoA synthetase-like 73 192 - -
Rops2g04434 194 ProSitePatterns Putative AMP-binding domain signature. 98 109 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04434 Rops-Chr2 81020464 81021048 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04434 80 190 Monolignol Biosynthesis Gene Families AT5G63380 40.164 1.04e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04434 K01904 - lja:Lj1g3v3833570.1 142.51