Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04430 ATGGATACCTTGTTTAGGTTAGTCAATTTCCAACAACAACAACAACCCGATCAATCCCTCAACTCCACCACCACCAGCAGCTCTAGATCCTCCAAACAAAACTATCATTATTACCAGCAAGAAGACGAAGAATGCTTTAACTTTTACATGGATGAAGAAGACTTATCCTCGTCTTCTTCGAAACACTACTACCCTTATCAACCCCACCACCATGTTTCCACCACTAACACCACCTTTGACACAAGCACAATCAACACCACCCCCACCACTACCACCACCGATTACTCCTTGTCACCCACCCCTGAAGTCTTGAACTTTGAATTCTCCGGCAAATGGGCACCCGACATCCTCATCGAAACTGCACGTGCCATTGCTGACAAGAACAGCAATCGAGTGCAACAACTGATGTGGATGCTGAATGAACTAAGCTCCCCTTATGGTGACACTGATCAAAAGCTTGCAGCTTATTTTCTTCAAGCCTTGTTTAGCCGCATGACCGATGCAGGGGACCGAACCTACCGAACCTTAGCTTTGGCTTCTGAGAAAACATGCTCCTTCGAATCAACGAGGAAGATGTTGTTGAAGTTTCAAGAGGTTAGTCCATGGACAACCTTCGGCCACGTGGCTTCTAATGGTGCCATCTTAGAAGCCTTAGAAGGTAACCCTAAACTCCACATAGTTGACATTAGCAACACATATTGCACCCAATGGCCTACCCTTCTAGAAGCTCTCGCCACTCGCACCGATGACACCCCTCACCTCAGGTTAACCTCCGTCATCACCGGTGGCGGCTCCGTTCAAAGGGTAATGAAGGAAATAGGCACGAGGATGGAGAAATTCGCGAGACTCATGGGAGTGCCATTCAAATTCAACATCATTCACCACTCCGGTGATCTTTCAAACTTCAACTTCTCTGAGTTAGACATCCAAGACGACGAAGCTTTGGCCGTTAATTGTGTCAACTCTTTGCACTCAGTAACCGCCACCGGAAATAACCGTGACACGTTGATATCTTTGCTTCGTGGATTGAATCCTAGGGTTTTGACGGTGGTGGAAGAGGAAGCTGATCTCGACGTTGGTTATGAGTTCGTGGAAGGGTTCAGAGAGTGTTTGAGATGGTTTAGGGTTTACTTTGAAGCACTTGACGAGAGCTTTGCGAGGACAAGTAGCGAGAGATTGATGCTGGAACGTGCAGCGGGGAAAGCCATCGTTGACTTGCTTGCTTGCGATCCCTCCGAGTCGGTGGAGCGTCGGCACACGGCGGCGCGGTGGACCCAACGTATGTATGGCGGTGGGTTCAATACGATGCCGTTTAGCGAGGAGGTTTGCGACGACGTCAGGGCACTGTTACGGAGGTACACGGAGGGGTGGTCGATGACACAGTGCTCCGACGCCGGGATATTCTTGTCGTGGAAGGACCAGCCGGTGGTGTGGGCCAGTGCATGGAGGCCTTGA 1455 0.4969 MDTLFRLVNFQQQQQPDQSLNSTTTSSSRSSKQNYHYYQQEDEECFNFYMDEEDLSSSSSKHYYPYQPHHHVSTTNTTFDTSTINTTPTTTTTDYSLSPTPEVLNFEFSGKWAPDILIETARAIADKNSNRVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDAGDRTYRTLALASEKTCSFESTRKMLLKFQEVSPWTTFGHVASNGAILEALEGNPKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTSVITGGGSVQRVMKEIGTRMEKFARLMGVPFKFNIIHHSGDLSNFNFSELDIQDDEALAVNCVNSLHSVTATGNNRDTLISLLRGLNPRVLTVVEEEADLDVGYEFVEGFRECLRWFRVYFEALDESFARTSSERLMLERAAGKAIVDLLACDPSESVERRHTAARWTQRMYGGGFNTMPFSEEVCDDVRALLRRYTEGWSMTQCSDAGIFLSWKDQPVVWASAWRP* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04430 484 ProSiteProfiles GRAS family profile. 104 483 IPR005202 -
Rops2g04430 484 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 113 476 IPR005202 -
Rops2g04430 484 MobiDBLite consensus disorder prediction 8 34 - -
Rops2g04430 484 Pfam GRAS domain family 116 483 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04430 Rops-Chr2 80968686 80970375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04430 1 484 GRAS Transcription Factor Family AT4G37650 59.434 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops2g04430 GRAS 1.7e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04430 - - gmx:100778524 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04430 2 80968686 80970375 Rops2g04430 2 80968686 80970375 ECH
Rops1g01887 1 38541241 38543282 Rops2g04430 2 80968686 80970375 PCT